RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 PLPPR4Q7Z2D5 763 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 C4orf19Q8IY42 314 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 ELOA2Q8IYF1 753 aaPredicted RBP15.32■□□□□ 0.04
ITGB4-209ENST00000583327 OR6J1Q8NGC5 347 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 SNX29Q8TEQ0 813 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 TIGD1Q96MW7 591 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 HMX1Q9NP08 348 aaPredicted RBP15.32■□□□□ 0.04
ITGB4-209ENST00000583327 BLOC1S4Q9NUP1 217 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 DDX20Q9UHI6 824 aaKnown RBP15.32■□□□□ 0.04
ITGB4-209ENST00000583327 EMSYQ7Z589 1322 aa15.32■□□□□ 0.04
ITGB4-209ENST00000583327 POLR2DO15514 142 aaKnown RBP15.31■□□□□ 0.04
ITGB4-209ENST00000583327 ZNF862O60290 1169 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 SORBS3O60504 671 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 ADAMTS4O75173 837 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 ZNF202O95125 648 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 TCF7P36402 384 aaPredicted RBP15.31■□□□□ 0.04
ITGB4-209ENST00000583327 SYKP43405 635 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 PSMC5P62195 406 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 UGCGQ16739 394 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 LONRF3Q496Y0 759 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 CCSAPQ6IQ19 270 aaPredicted RBP15.31■□□□□ 0.04
ITGB4-209ENST00000583327 SWSAP1Q6NVH7 229 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 KCNK18Q7Z418 384 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 TLK2Q86UE8 772 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 CCDC60Q8IWA6 550 aaPredicted RBP15.31■□□□□ 0.04
ITGB4-209ENST00000583327 KLHDC9Q8NEP7 349 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 SH3TC2Q8TF17 1288 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 LENG1Q96BZ8 264 aaPredicted RBP15.31■□□□□ 0.04
ITGB4-209ENST00000583327 ARMC5Q96C12 935 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 PYM1Q9BRP8 204 aaKnown RBP15.31■□□□□ 0.04
ITGB4-209ENST00000583327 C16orf70Q9BSU1 422 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 NT5C3AQ9H0P0 336 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 ZSWIM4Q9H7M6 989 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 PAK6Q9NQU5 681 aaPredicted RBP15.31■□□□□ 0.04
ITGB4-209ENST00000583327 CCDC39Q9UFE4 941 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 USP25Q9UHP3 1055 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 TCEAL9Q9UHQ7 104 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 IGSF9BQ9UPX0 1349 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 KDM3AQ9Y4C1 1321 aa15.31■□□□□ 0.04
ITGB4-209ENST00000583327 POTEB3A0JP26 581 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 ACTN4O43707 911 aaKnown RBP15.3■□□□□ 0.04
ITGB4-209ENST00000583327 MSCO60682 206 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 MBD3O95983 291 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 MMP3P08254 477 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 SLFN14P0C7P3 912 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 PLCG1P19174 1290 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 CST5P28325 142 aaPredicted RBP15.3■□□□□ 0.04
ITGB4-209ENST00000583327 CNGA1P29973 690 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 TXLNAP40222 546 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 PSMC6P62333 389 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 IRX5P78411 483 aaPredicted RBP15.3■□□□□ 0.04
ITGB4-209ENST00000583327 CTTNQ14247 550 aaKnown RBP15.3■□□□□ 0.04
ITGB4-209ENST00000583327 RRAGBQ5VZM2 374 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 PDXDC2PQ6P474 469 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 POTEBQ6S5H4 581 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 CCDC73Q6ZRK6 1079 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 SH3RF1Q7Z6J0 888 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 IQUBQ8NA54 791 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 BANK1Q8NDB2 785 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 CALML4Q96GE6 196 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 LXNQ9BS40 222 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 PANK2Q9BZ23 570 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 CUEDC2Q9H467 287 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 DOCK5Q9H7D0 1870 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 GABBR1Q9UBS5 961 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 STK17AQ9UEE5 414 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 SAMM50Q9Y512 469 aa15.3■□□□□ 0.04
ITGB4-209ENST00000583327 SYNRGQ9UMZ2 1314 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
ITGB4-209ENST00000583327 DKC1O60832 514 aaKnown RBP eCLIP15.29■□□□□ 0.04
ITGB4-209ENST00000583327 RARBP10826 455 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 CPT1AP50416 773 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 SLC26A2P50443 739 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 STAT5BP51692 787 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 MDM2Q00987 491 aaPredicted RBP15.29■□□□□ 0.04
ITGB4-209ENST00000583327 SP4Q02446 784 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 CYP4A11Q02928 519 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 DGKDQ16760 1214 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 KLHL40Q2TBA0 621 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 SLC9C1Q4G0N8 1177 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 TPH2Q8IWU9 490 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 NACC1Q96RE7 527 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 CEP89Q96ST8 783 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 MTRQ99707 1265 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 NIFKQ9BYG3 293 aaKnown RBP15.29■□□□□ 0.04
ITGB4-209ENST00000583327 AP5M1Q9H0R1 490 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 SMARCAD1Q9H4L7 1026 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 ZNF302Q9NR11 478 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 DDX19AQ9NUU7 478 aaKnown RBP15.29■□□□□ 0.04
ITGB4-209ENST00000583327 KBTBD4Q9NVX7 518 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 DACT1Q9NYF0 836 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 DBR1Q9UK59 544 aaKnown RBP15.29■□□□□ 0.04
ITGB4-209ENST00000583327 KIAA1024Q9UPX6 916 aa15.29■□□□□ 0.04
ITGB4-209ENST00000583327 HAS3O00219 553 aa15.28■□□□□ 0.04
ITGB4-209ENST00000583327 ZBTB39O15060 712 aa15.28■□□□□ 0.04
ITGB4-209ENST00000583327 KPNA6O60684 536 aa15.28■□□□□ 0.04
ITGB4-209ENST00000583327 EYA4O95677 639 aa15.28■□□□□ 0.04
ITGB4-209ENST00000583327 LGALS2P05162 132 aa15.28■□□□□ 0.04
ITGB4-209ENST00000583327 FSCN1Q16658 493 aaKnown RBP15.28■□□□□ 0.04
ITGB4-209ENST00000583327 SKOR2Q2VWA4 1001 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms