RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 IQCF3P0C7M6 154 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 CYP3A7P24462 503 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 MCM2P49736 904 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 SAFBQ15424 915 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 TMEM240Q5SV17 173 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 LRCH2Q5VUJ6 765 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 FAM160B1Q5W0V3 765 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 ZNF746Q6NUN9 644 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 ABHD15Q6UXT9 468 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 ZNF365Q70YC5 407 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 LRRC8DQ7L1W4 858 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 C16orf59Q7L2K0 433 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 SERINC5Q86VE9 423 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 RPUSD2Q8IZ73 545 aaKnown RBP14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 AFAP1L1Q8TED9 768 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 LMBR1Q8WVP7 490 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 GJA10Q969M2 543 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 LRCH3Q96II8 777 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 TMX3Q96JJ7 454 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 TEKT3Q9BXF9 490 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 SAMM50Q9Y512 469 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 LAMA3Q16787 3333 aa14.26□□□□□ -0.13
SMARCE1-218ENST00000582955 TANC1Q9C0D5 1861 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 FAM205CA6NFA0 338 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 CHMP2AO43633 222 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 CCNT1O60563 726 aaKnown RBP14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 FGBP02675 491 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 CKBP12277 381 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 SELPP16109 830 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 GCFC2P16383 781 aaKnown RBP14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 HOXC8P31273 242 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 RFC2P35250 354 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 THPOP40225 353 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 IGBP1P78318 339 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 GRIK4Q16099 956 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 EARS2Q5JPH6 523 aaKnown RBP14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 SWSAP1Q6NVH7 229 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 PDXDC2PQ6P474 469 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 PLPPR4Q7Z2D5 763 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 CCDC60Q8IWA6 550 aaPredicted RBP14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 SMAP1Q8IYB5 467 aaPredicted RBP14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 SLC5A5Q92911 643 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 TNFRSF25Q93038 417 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 WNT8BQ93098 351 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 MBOAT7Q96N66 472 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 RIT2Q99578 217 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 NAP1L4Q99733 375 aaKnown RBP14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 ZNF302Q9NR11 478 aa14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 TRIP12Q14669 1992 aaPredicted RBP14.25□□□□□ -0.13
SMARCE1-218ENST00000582955 IGKV6D-21A0A0A0MT36 114 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 WDR64B1ANS9 1081 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 SLC37A4O43826 429 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 MARCH6O60337 910 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 PSAPP07602 524 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 PFKMP08237 780 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 SLC26A2P50443 739 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 RBL2Q08999 1139 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 PLCB4Q15147 1175 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 TRIM71Q2Q1W2 868 aaKnown RBP14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 ZNF618Q5T7W0 954 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 PPP4R3AQ6IN85 833 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 OTOP2Q7RTS6 562 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 CKAP2LQ8IYA6 745 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 FTOQ9C0B1 505 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 MTIF3Q9H2K0 278 aaKnown RBP14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 UNC45AQ9H3U1 944 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 TUBE1Q9UJT0 475 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 PCDHA10Q9Y5I2 948 aa14.24□□□□□ -0.13
SMARCE1-218ENST00000582955 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 RRN3P2A6NIE6 340 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 PSMD10O75832 226 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 CTSHP09668 335 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 INSRRP14616 1297 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 GNL2Q13823 731 aaKnown RBP14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 TRMT1LQ7Z2T5 733 aaKnown RBP14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 ETNPPLQ8TBG4 499 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 DISC1Q9NRI5 854 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 GABBR1Q9UBS5 961 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 KIF3AQ9Y496 699 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 SCN5AQ14524 2016 aa14.23□□□□□ -0.13
SMARCE1-218ENST00000582955 KAT6AQ92794 2004 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 ZBBXA8MT70 800 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 HBP1O60381 514 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 PARNO95453 639 aaKnown RBP14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 ACTN1P12814 892 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 SFNP31947 248 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 JAK3P52333 1124 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 ADAM17P78536 824 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 TAF2Q6P1X5 1199 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 RUFY4Q6ZNE9 571 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 MIER3Q7Z3K6 550 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 FBXO18Q8NFZ0 1043 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 ATP8B4Q8TF62 1192 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 TRAPPC12Q8WVT3 735 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 HERVK_113Q902F9 699 aa14.22□□□□□ -0.13
SMARCE1-218ENST00000582955 RSPH10B2B2RC85 870 aa14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 CAND2O75155 1236 aa14.21□□□□□ -0.13
SMARCE1-218ENST00000582955 RSPH10BP0C881 870 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms