RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
SRSF1-205ENST00000582730 RUSC1Q9BVN2 902 aa15.07■□□□□ 0
SRSF1-205ENST00000582730 BCAS3Q9H6U6 928 aa15.07■□□□□ 0
SRSF1-205ENST00000582730 JADE2Q9NQC1 790 aa15.07■□□□□ 0
SRSF1-205ENST00000582730 PPP1R1BQ9UD71 204 aaPredicted RBP15.07■□□□□ 0
SRSF1-205ENST00000582730 VAV3Q9UKW4 847 aa15.07■□□□□ 0
SRSF1-205ENST00000582730 MAP2K7O14733 419 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 ZNF263O14978 683 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 MYBP10242 640 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 MMP14P50281 582 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 VAV2P52735 878 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 POLR2FP61218 127 aaKnown RBP15.06■□□□□ 0
SRSF1-205ENST00000582730 NBPF9Q3BBW0 867 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 SRLQ86TD4 932 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 SYT2Q8N9I0 419 aaPredicted RBP15.06■□□□□ 0
SRSF1-205ENST00000582730 SECISBP2LQ93073 1101 aaKnown RBP15.06■□□□□ 0
SRSF1-205ENST00000582730 CEP63Q96MT8 703 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 WDR18Q9BV38 432 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 VCPKMTQ9H867 229 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 PITPNM2Q9BZ72 1349 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
SRSF1-205ENST00000582730 DDX39AO00148 427 aaKnown RBP15.06■□□□□ 0
SRSF1-205ENST00000582730 USO1O60763 962 aaKnown RBP15.06■□□□□ 0
SRSF1-205ENST00000582730 CIITAP33076 1130 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 ACTN2P35609 894 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 KCNMA1Q12791 1236 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 ANKRD13CQ8N6S4 541 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 KCTD10Q9H3F6 313 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 SAR1BQ9Y6B6 198 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 SHTN1A0MZ66 631 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 GAS7O60861 476 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 NAP1L1P55209 391 aaKnown RBP15.06■□□□□ 0
SRSF1-205ENST00000582730 TRAF1Q13077 416 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 DCAF17Q5H9S7 520 aaPredicted RBP15.06■□□□□ 0
SRSF1-205ENST00000582730 TCERG1LQ5VWI1 586 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 DYDC2Q96IM9 177 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 GMLQ99445 158 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 RRP15Q9Y3B9 282 aaKnown RBP15.06■□□□□ 0
SRSF1-205ENST00000582730 PCDHA13Q9Y5I0 950 aa15.06■□□□□ 0
SRSF1-205ENST00000582730 GNA14O95837 355 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 HOXA7P31268 230 aaPredicted RBP15.05■□□□□ -0
SRSF1-205ENST00000582730 RAPGEF1Q13905 1077 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 BRD3Q15059 726 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 NOA1Q8NC60 698 aaKnown RBP15.05■□□□□ -0
SRSF1-205ENST00000582730 PSMD1Q99460 953 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 ZNF341Q9BYN7 854 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 MLXIPQ9HAP2 919 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 PDE11AQ9HCR9 933 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 ZNRF3Q9ULT6 936 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 MRPL11Q9Y3B7 192 aaKnown RBP15.05■□□□□ -0
SRSF1-205ENST00000582730 ZNF646O15015 1829 aaPredicted RBP15.05■□□□□ -0
SRSF1-205ENST00000582730 PIK3CDO00329 1044 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 ZBTB39O15060 712 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 CAP2P40123 477 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 AMPD2Q01433 879 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 GFPT1Q06210 699 aaPredicted RBP15.05■□□□□ -0
SRSF1-205ENST00000582730 SF3B2Q13435 895 aaKnown RBP15.05■□□□□ -0
SRSF1-205ENST00000582730 PDXDC1Q6P996 788 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 CPXCR1Q8N123 301 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 BAP1Q92560 729 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 SH2D4AQ9H788 454 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 ANKZF1Q9H8Y5 726 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 VPS18Q9P253 973 aa15.05■□□□□ -0
SRSF1-205ENST00000582730 IGLV3-22A0A075B6J6 115 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 FAM13AO94988 1023 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 POTEAQ6S8J7 498 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 LDHDQ86WU2 507 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 PNKPQ96T60 521 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 TSGA10Q9BZW7 698 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 CLIC2O15247 247 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 MOCS3O95396 460 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 MAGEA1P43355 309 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 CDK17Q00537 523 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 CXCL9Q07325 125 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 KNOP1Q1ED39 458 aaKnown RBP15.04■□□□□ -0
SRSF1-205ENST00000582730 TRAPPC11Q7Z392 1133 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 TRIM59Q8IWR1 403 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 PSMB7Q99436 277 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 ZNF577Q9BSK1 485 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 HOMER2Q9NSB8 354 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 CCPG1Q9ULG6 757 aa15.04■□□□□ -0
SRSF1-205ENST00000582730 FRMD3A2A2Y4 597 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 SLC26A4O43511 780 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 CYP3A4P08684 503 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 KCNH2Q12809 1159 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 SFMBT2Q5VUG0 894 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 MYCT1Q8N699 235 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 AGBL1Q96MI9 1066 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.03■□□□□ -03e-6■□□□□ 10.5
SRSF1-205ENST00000582730 RANBP17Q9H2T7 1088 aaKnown RBP15.03■□□□□ -0
SRSF1-205ENST00000582730 EHMT1Q9H9B1 1298 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 EFCC1Q9HA90 598 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 ARMCX3Q9UH62 379 aaPredicted RBP15.03■□□□□ -0
SRSF1-205ENST00000582730 COL2A1P02458 1487 aaPredicted RBP15.03■□□□□ -0
SRSF1-205ENST00000582730 COL4A5P29400 1685 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 TULP1O00294 542 aaPredicted RBP15.03■□□□□ -0
SRSF1-205ENST00000582730 WNT10BO00744 389 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 ZNF185O15231 689 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 EYA4O95677 639 aa15.03■□□□□ -0
SRSF1-205ENST00000582730 KCNA1Q09470 495 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms