RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.79□□□□□ -0.68
GGA3-212ENST00000582376 DMXL1Q9Y485 3027 aa10.79□□□□□ -0.68
GGA3-212ENST00000582376 CHD6Q8TD26 2715 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 PRR5-ARHGAP8B1AHC4 643 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 STK25O00506 426 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 TOP1P11387 765 aaKnown RBP10.78□□□□□ -0.68
GGA3-212ENST00000582376 UBA1P22314 1058 aaKnown RBP10.78□□□□□ -0.68
GGA3-212ENST00000582376 RFX1P22670 979 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 ADAM17P78536 824 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 ARHGAP8P85298 464 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 FBXO47Q5MNV8 452 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 TAF2Q6P1X5 1199 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 RSPH3Q86UC2 560 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 FTSJ3Q8IY81 847 aaKnown RBP10.78□□□□□ -0.68
GGA3-212ENST00000582376 SUMF1Q8NBK3 374 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 RTKNQ9BST9 563 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 USP26Q9BXU7 913 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 FTHL17Q9BXU8 183 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 ENTPD7Q9NQZ7 604 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 CYP26B1Q9NR63 512 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 PXMP2Q9NR77 195 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 NCDNQ9UBB6 729 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 LRFN2Q9ULH4 789 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 USTQ9Y2C2 406 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 ABCB11O95342 1321 aa10.78□□□□□ -0.68
GGA3-212ENST00000582376 DCDC2BA2VCK2 349 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 M0R2C6 588 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 NOP56O00567 594 aaKnown RBP10.77□□□□□ -0.69
GGA3-212ENST00000582376 RNF113AO15541 343 aaKnown RBP10.77□□□□□ -0.69
GGA3-212ENST00000582376 RANBP6O60518 1105 aaKnown RBP10.77□□□□□ -0.69
GGA3-212ENST00000582376 SP9P0CG40 484 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 TGFB3P10600 412 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 PDHBP11177 359 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 SCG2P13521 617 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 GATMP50440 423 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 SP2Q02086 613 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 ZNF543Q08ER8 600 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 APOBRQ0VD83 1088 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 TDGQ13569 410 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 RTN4RL1Q86UN2 441 aaPredicted RBP10.77□□□□□ -0.69
GGA3-212ENST00000582376 LMBR1Q8WVP7 490 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 TCF25Q9BQ70 676 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 TMEM47Q9BQJ4 181 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 NGRNQ9NPE2 291 aaKnown RBP10.77□□□□□ -0.69
GGA3-212ENST00000582376 SH2B1Q9NRF2 756 aaPredicted RBP10.77□□□□□ -0.69
GGA3-212ENST00000582376 PUF60Q9UHX1 559 aaKnown RBP10.77□□□□□ -0.69
GGA3-212ENST00000582376 DBR1Q9UK59 544 aaKnown RBP10.77□□□□□ -0.69
GGA3-212ENST00000582376 DUSP12Q9UNI6 340 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 LZTS1Q9Y250 596 aa10.77□□□□□ -0.69
GGA3-212ENST00000582376 SUPT16HQ9Y5B9 1047 aaKnown RBP10.77□□□□□ -0.69
GGA3-212ENST00000582376 USP24Q9UPU5 2620 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 HIDE1A8MVS5 230 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 KINO60870 393 aaKnown RBP10.76□□□□□ -0.69
GGA3-212ENST00000582376 RAB11FIP3O75154 756 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 EOMESO95936 686 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 ZFYP08048 801 aaPredicted RBP10.76□□□□□ -0.69
GGA3-212ENST00000582376 WEE2P0C1S8 567 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 HSPD1P10809 573 aaKnown RBP10.76□□□□□ -0.69
GGA3-212ENST00000582376 MYCLP12524 364 aaPredicted RBP10.76□□□□□ -0.69
GGA3-212ENST00000582376 CD52P31358 61 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 LMNB2Q03252 620 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 DMWDQ09019 674 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 TBC1D8BQ0IIM8 1120 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 VARS2Q5ST30 1063 aaKnown RBP10.76□□□□□ -0.69
GGA3-212ENST00000582376 RUFY4Q6ZNE9 571 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 KBTBD3Q8NAB2 608 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 COLGALT1Q8NBJ5 622 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 MRPS27Q92552 414 aaKnown RBP10.76□□□□□ -0.69
GGA3-212ENST00000582376 AGO3Q9H9G7 860 aaKnown RBP10.76□□□□□ -0.69
GGA3-212ENST00000582376 ZNF215Q9UL58 517 aaPredicted RBP10.76□□□□□ -0.69
GGA3-212ENST00000582376 HCFC2Q9Y5Z7 792 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 CDY2AQ9Y6F7 541 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 NRCAMQ92823 1304 aa10.76□□□□□ -0.69
GGA3-212ENST00000582376 CTDSPL2Q05D32 466 aa10.75□□□□□ -0.69
GGA3-212ENST00000582376 CDC37Q16543 378 aaPredicted RBP10.75□□□□□ -0.69
GGA3-212ENST00000582376 ATAT1Q5SQI0 421 aa10.75□□□□□ -0.69
GGA3-212ENST00000582376 RARS2Q5T160 578 aaKnown RBP10.75□□□□□ -0.69
GGA3-212ENST00000582376 KIAA1841Q6NSI8 718 aa10.75□□□□□ -0.69
GGA3-212ENST00000582376 SECISBP2LQ93073 1101 aaKnown RBP10.75□□□□□ -0.69
GGA3-212ENST00000582376 ACSF2Q96CM8 615 aaPredicted RBP10.75□□□□□ -0.69
GGA3-212ENST00000582376 PDCD2LQ9BRP1 358 aa10.75□□□□□ -0.69
GGA3-212ENST00000582376 MRPL11Q9Y3B7 192 aaKnown RBP10.75□□□□□ -0.69
GGA3-212ENST00000582376 FAM208BQ5VWN6 2430 aa10.75□□□□□ -0.69
GGA3-212ENST00000582376 FANCMQ8IYD8 2048 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 TBKBP1A7MCY6 615 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 CFBP00751 764 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 HOXB3P14651 431 aaPredicted RBP10.74□□□□□ -0.69
GGA3-212ENST00000582376 IBSPP21815 317 aaPredicted RBP10.74□□□□□ -0.69
GGA3-212ENST00000582376 PLCB3Q01970 1234 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 COL9A3Q14050 684 aaPredicted RBP10.74□□□□□ -0.69
GGA3-212ENST00000582376 SPECC1Q5M775 1068 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 UTP14CQ5TAP6 766 aaKnown RBP10.74□□□□□ -0.69
GGA3-212ENST00000582376 XRRA1Q6P2D8 792 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 VSIG10LQ86VR7 867 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 TRIM50Q86XT4 487 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 C1orf210Q8IVY1 113 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 DNAJB3Q8WWF6 145 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 GPKOWQ92917 476 aaPredicted RBP eCLIP10.74□□□□□ -0.69
GGA3-212ENST00000582376 BORCS6Q96GS4 357 aa10.74□□□□□ -0.69
GGA3-212ENST00000582376 WNT16Q9UBV4 365 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms