RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ASCL5Q7RTU5 278 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 ERMP1Q7Z2K6 904 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 ADGRD2Q7Z7M1 963 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 VSIG10LQ86VR7 867 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 PI4K2BQ8TCG2 481 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 SPPL3Q8TCT6 385 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 ZNF689Q96CS4 500 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-205ENST00000582331 PDCD2LQ9BRP1 358 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 RC3H2Q9HBD1 1191 aaKnown RBP8.86□□□□□ -0.99
CCDC47-205ENST00000582331 VAT1LQ9HCJ6 419 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 SETD4Q9NVD3 440 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 VPS9D1Q9Y2B5 631 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 ZFHX2Q9C0A1 2572 aaPredicted RBP8.86□□□□□ -0.99
CCDC47-205ENST00000582331 ATG2AQ2TAZ0 1938 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 MYO7AQ13402 2215 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 CCDC171Q6TFL3 1326 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 NOP56O00567 594 aaKnown RBP8.85□□□□□ -0.99
CCDC47-205ENST00000582331 KDM4AO75164 1064 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 DGKIO75912 1065 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 CHRNA1P02708 482 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 GHRP10912 638 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 PCP11498 1178 aaKnown RBP8.85□□□□□ -0.99
CCDC47-205ENST00000582331 UBA1P22314 1058 aaKnown RBP8.85□□□□□ -0.99
CCDC47-205ENST00000582331 HSD17B4P51659 736 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 PTPN21Q16825 1174 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 QRICH1Q2TAL8 776 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 MFSD6Q6ZSS7 791 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 STOX1Q6ZVD7 989 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 RBM23Q86U06 439 aaKnown RBP8.85□□□□□ -0.99
CCDC47-205ENST00000582331 DGKHQ86XP1 1220 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 POF1BQ8WVV4 589 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 RIPOR3Q96MK2 946 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 ZKSCAN3Q9BRR0 538 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 USP26Q9BXU7 913 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 ADAM33Q9BZ11 813 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 TLE6Q9H808 572 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 EHMT1Q9H9B1 1298 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 HELLSQ9NRZ9 838 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 MAP3K20Q9NYL2 800 aaKnown RBP8.85□□□□□ -0.99
CCDC47-205ENST00000582331 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
CCDC47-205ENST00000582331 BARX2Q9UMQ3 279 aaPredicted RBP8.85□□□□□ -0.99
CCDC47-205ENST00000582331 MRPL42Q9Y6G3 142 aaKnown RBP8.85□□□□□ -0.99
CCDC47-205ENST00000582331 PRR23AA6NEV1 266 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 GLP2RO95838 553 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 ITGB1P05556 798 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 ATF7P17544 494 aaPredicted RBP8.84□□□□□ -0.99
CCDC47-205ENST00000582331 CCND2P30279 289 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 HAND2P61296 217 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 ADAM17P78536 824 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 ARHGAP4P98171 946 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 GHRHRQ02643 423 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 LPIN1Q14693 890 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 PGM5Q15124 567 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 ASPRV1Q53RT3 343 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 CCDC178Q5BJE1 867 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 TYW1BQ6NUM6 668 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 ZBTB33Q86T24 672 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 CMTR2Q8IYT2 770 aaKnown RBP8.84□□□□□ -0.99
CCDC47-205ENST00000582331 KLHL23Q8NBE8 558 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 MICAL1Q8TDZ2 1067 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 ESR2Q92731 530 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 AMNQ9BXJ7 453 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 RNF41Q9H4P4 317 aaPredicted RBP8.84□□□□□ -0.99
CCDC47-205ENST00000582331 BCAS3Q9H6U6 928 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 KAT14Q9H8E8 782 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 JMJD4Q9H9V9 463 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 ZNF215Q9UL58 517 aaPredicted RBP8.84□□□□□ -0.99
CCDC47-205ENST00000582331 PCDHGA10Q9Y5H3 936 aa8.84□□□□□ -0.99
CCDC47-205ENST00000582331 NRCAMQ92823 1304 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 PLXNA3P51805 1871 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 DPYSL4O14531 572 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 OPLAHO14841 1288 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 PDGFBP01127 241 aaPredicted RBP8.83□□□□□ -1
CCDC47-205ENST00000582331 PARP1P09874 1014 aaKnown RBP8.83□□□□□ -1
CCDC47-205ENST00000582331 NBL1P41271 181 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 ID4P47928 161 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 MGAT3Q09327 533 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 NEDD9Q14511 834 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 MCMDC2Q4G0Z9 681 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 UTP14CQ5TAP6 766 aaKnown RBP8.83□□□□□ -1
CCDC47-205ENST00000582331 TAF2Q6P1X5 1199 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 METTL7BQ6UX53 244 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 RSPH3Q86UC2 560 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 IQCA1Q86XH1 822 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 SAMD3Q8N6K7 520 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 IL31RAQ8NI17 732 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 OTUD7AQ8TE49 926 aaPredicted RBP8.83□□□□□ -1
CCDC47-205ENST00000582331 LMBR1Q8WVP7 490 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 SUSD6Q92537 303 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 GPKOWQ92917 476 aaPredicted RBP eCLIP8.83□□□□□ -1
CCDC47-205ENST00000582331 NEK1Q96PY6 1258 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 GPR20Q99678 358 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 EPAS1Q99814 870 aa8.83□□□□□ -1
CCDC47-205ENST00000582331 FSD2A1L4K1 749 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 GCOM1H8Y6P7 765 aaPredicted RBP8.82□□□□□ -1
CCDC47-205ENST00000582331 PER2O15055 1255 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 PPFIA3O75145 1194 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 POLR2MP0CAP2 368 aa8.82□□□□□ -1
CCDC47-205ENST00000582331 STAG3L1P0CL83 205 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms