RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 CDC14BO60729 498 aa7.15□□□□□ -1.26
SMCHD1-207ENST00000581711 POLD1P28340 1107 aa7.15□□□□□ -1.26
SMCHD1-207ENST00000581711 DUSP8Q13202 625 aa7.15□□□□□ -1.26
SMCHD1-207ENST00000581711 FNDC7Q5VTL7 733 aa7.15□□□□□ -1.26
SMCHD1-207ENST00000581711 TELO2Q9Y4R8 837 aa7.15□□□□□ -1.26
SMCHD1-207ENST00000581711 CUTAO60888 179 aa7.14□□□□□ -1.27
SMCHD1-207ENST00000581711 CAPNS1P04632 268 aa7.14□□□□□ -1.27
SMCHD1-207ENST00000581711 ADH4P08319 380 aa7.14□□□□□ -1.27
SMCHD1-207ENST00000581711 TOP3AQ13472 1001 aaPredicted RBP7.14□□□□□ -1.27
SMCHD1-207ENST00000581711 TUBA3CQ13748 450 aa7.14□□□□□ -1.27
SMCHD1-207ENST00000581711 TUBA3EQ6PEY2 450 aa7.14□□□□□ -1.27
SMCHD1-207ENST00000581711 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.14□□□□□ -1.27
SMCHD1-207ENST00000581711 PLA2G12BQ9BX93 195 aa7.14□□□□□ -1.27
SMCHD1-207ENST00000581711 NUB1Q9Y5A7 615 aa7.14□□□□□ -1.27
SMCHD1-207ENST00000581711 MATN2O00339 956 aa7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 PPFIA2O75334 1257 aa7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 GRIA2P42262 883 aa7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 RRADP55042 308 aa7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 MAP4K2Q12851 820 aa7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 NOLC1Q14978 699 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 ZMAT1Q5H9K5 638 aa7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 LARP1BQ659C4 914 aaKnown RBP7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 ZNF808Q8N4W9 903 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 LARP4BQ92615 738 aaKnown RBP7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 TINF2Q9BSI4 451 aa7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 MMRN2Q9H8L6 949 aa7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 NR2E1Q9Y466 385 aa7.13□□□□□ -1.27
SMCHD1-207ENST00000581711 ESYT3A0FGR9 886 aa7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 SMAD7O15105 426 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 COL6A2P12110 1019 aa7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 MRM1Q6IN84 353 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 NPM2Q86SE8 214 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 ZNF483Q8TF39 744 aaPredicted RBP7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 KCTD13Q8WZ19 329 aa7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 ZG16BQ96DA0 208 aa7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 PHF20Q9BVI0 1012 aa7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 ACTR10Q9NZ32 417 aa7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 TNFRSF18Q9Y5U5 241 aa7.12□□□□□ -1.27
SMCHD1-207ENST00000581711 GRK2P25098 689 aa7.11□□□□□ -1.27
SMCHD1-207ENST00000581711 GRK3P35626 688 aa7.11□□□□□ -1.27
SMCHD1-207ENST00000581711 SPIRE1Q08AE8 756 aa7.11□□□□□ -1.27
SMCHD1-207ENST00000581711 CRAMP1Q96RY5 1269 aa7.11□□□□□ -1.27
SMCHD1-207ENST00000581711 AGAP2Q99490 1192 aa7.11□□□□□ -1.27
SMCHD1-207ENST00000581711 C12orf65Q9H3J6 166 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-207ENST00000581711 ACOT7O00154 380 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 NKRFO15226 690 aaKnown RBP eCLIP7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 GNAT1P11488 350 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 ATF4P18848 351 aaPredicted RBP7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 MAKP20794 623 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 RPS19P39019 145 aaKnown RBP7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 EPHA5P54756 1037 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 HABP4Q5JVS0 413 aaKnown RBP7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 PCSK4Q6UW60 755 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 USP53Q70EK8 1073 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 MRGPRGQ86SM5 289 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 KCNJ15Q99712 375 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 SLC39A2Q9NP94 309 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 DSEQ9UL01 958 aa7.1□□□□□ -1.27
SMCHD1-207ENST00000581711 DDAH1O94760 285 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 ETV4P43268 484 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 PPP2R2AP63151 447 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 FOXL1Q12952 345 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 NFYCQ13952 458 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 RSPO2Q6UXX9 243 aaPredicted RBP7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 KCTD1Q719H9 257 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 SCYL1Q96KG9 808 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 TLR9Q9NR96 1032 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 DMRT1Q9Y5R6 373 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 MRVI1Q9Y6F6 885 aa7.09□□□□□ -1.27
SMCHD1-207ENST00000581711 DNAJA1P31689 397 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 HIBADHP31937 336 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 MSX2P35548 267 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 HNRNPA0Q13151 305 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 TBR1Q16650 682 aa7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 DPP8Q6V1X1 898 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 ZNF627Q7L945 461 aa7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 IER2Q9BTL4 223 aa7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 ZNF703Q9H7S9 590 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 AURKAIP1Q9NWT8 199 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-207ENST00000581711 ARHGAP6O43182 974 aa7.07□□□□□ -1.28
SMCHD1-207ENST00000581711 DLX3O60479 287 aa7.07□□□□□ -1.28
SMCHD1-207ENST00000581711 KIZQ2M2Z5 673 aa7.07□□□□□ -1.28
SMCHD1-207ENST00000581711 TNNI3KQ59H18 835 aa7.07□□□□□ -1.28
SMCHD1-207ENST00000581711 LBX2Q6XYB7 198 aa7.07□□□□□ -1.28
SMCHD1-207ENST00000581711 MICAL1Q8TDZ2 1067 aa7.07□□□□□ -1.28
SMCHD1-207ENST00000581711 CFHR4Q92496 578 aa7.07□□□□□ -1.28
SMCHD1-207ENST00000581711 MSL2Q9HCI7 577 aa7.07□□□□□ -1.28
SMCHD1-207ENST00000581711 PUF60Q9UHX1 559 aaKnown RBP7.07□□□□□ -1.28
SMCHD1-207ENST00000581711 DBPQ10586 325 aaPredicted RBP7.06□□□□□ -1.28
SMCHD1-207ENST00000581711 SLC10A6Q3KNW5 377 aa7.06□□□□□ -1.28
SMCHD1-207ENST00000581711 NAALADL2Q58DX5 795 aa7.06□□□□□ -1.28
SMCHD1-207ENST00000581711 KIAA1683Q9H0B3 1180 aa7.06□□□□□ -1.28
SMCHD1-207ENST00000581711 PLA2G3Q9NZ20 509 aa7.06□□□□□ -1.28
SMCHD1-207ENST00000581711 CEP72Q9P209 647 aa7.06□□□□□ -1.28
SMCHD1-207ENST00000581711 AGRPO00253 132 aa7.05□□□□□ -1.28
SMCHD1-207ENST00000581711 GNL2Q13823 731 aaKnown RBP7.05□□□□□ -1.28
SMCHD1-207ENST00000581711 WDR72Q3MJ13 1102 aa7.05□□□□□ -1.28
SMCHD1-207ENST00000581711 EEPD1Q7L9B9 569 aa7.05□□□□□ -1.28
SMCHD1-207ENST00000581711 CLIP3Q96DZ5 547 aa7.05□□□□□ -1.28
SMCHD1-207ENST00000581711 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.05□□□□□ -1.285e-7■■□□□ 12.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms