RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 NR1I3Q14994 352 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 HERC4Q5GLZ8 1057 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CENPPQ6IPU0 288 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 RINT1Q6NUQ1 792 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 NLRX1Q86UT6 975 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 LRRC8AQ8IWT6 810 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CSGALNACT2Q8N6G5 542 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 EEF2KMTQ96G04 330 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 THAP9Q9H5L6 903 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 BCAS3Q9H6U6 928 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 TAB2Q9NYJ8 693 aa16.48■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CELF2O95319 508 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 KCNA2P16389 499 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ALDH5A1P51649 535 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 GSDMDP57764 484 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 UGCGQ16739 394 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ARMCX5Q6P1M9 558 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 SFR1Q86XK3 245 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 C17orf53Q8N3J3 647 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 NACC1Q96RE7 527 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 POLD4Q9HCU8 107 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 UNCXA6NJT0 531 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ZNF500O60304 480 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 P4HBP07237 508 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CYP2C8P10632 490 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 COPB1P53618 953 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 Q3C1V9 767 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CREBRFQ8IUR6 639 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 MYOCDQ8IZQ8 938 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 DNERQ8NFT8 737 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CTAGE1Q96RT6 745 aa16.47■□□□□ 0.23
CDK5RAP3-218ENST00000580391 POTEB2H3BUK9 544 aa16.46■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CLCN1P35523 988 aa16.46■□□□□ 0.23
CDK5RAP3-218ENST00000580391 CASP5P51878 434 aa16.46■□□□□ 0.23
CDK5RAP3-218ENST00000580391 FKBP1BP68106 108 aa16.46■□□□□ 0.23
CDK5RAP3-218ENST00000580391 KRT76Q01546 638 aa16.46■□□□□ 0.23
CDK5RAP3-218ENST00000580391 C1orf186Q6ZWK4 172 aa16.46■□□□□ 0.23
CDK5RAP3-218ENST00000580391 ZNF526Q8TF50 670 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-218ENST00000580391 MS4A4AQ96JQ5 239 aa16.46■□□□□ 0.23
CDK5RAP3-218ENST00000580391 VPS16Q9H269 839 aa16.46■□□□□ 0.23
CDK5RAP3-218ENST00000580391 SOWAHBA6NEL2 793 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 WDR64B1ANS9 1081 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 TBCAO75347 108 aaKnown RBP16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 JAK3P52333 1124 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CCZ1BP86790 482 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CCZ1P86791 482 aaPredicted RBP16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 GOLGA8FQ08AF8 430 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 GOLGA8DPQ0D2H9 430 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ANKRD20A12PQ8NF67 263 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 NOC3LQ8WTT2 800 aaKnown RBP16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 IWS1Q96ST2 819 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 TCEAL9Q9UHQ7 104 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CCL15-CCL14A0A0B4J2E2 113 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SORBS3O60504 671 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 STAM2O75886 525 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SLC25A27O95847 323 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PBX1P40424 430 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 QARSP47897 775 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 STXBP2Q15833 593 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CCL15Q16663 113 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 GNPTABQ3T906 1256 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 FILIP1LQ4L180 1135 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ZCWPW2Q504Y3 356 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SPECC1LQ69YQ0 1117 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 NELFCDQ8IXH7 590 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 FAM133AQ8N9E0 248 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CCDC150Q8NCX0 1101 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SCFD1Q8WVM8 642 aa16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CNOT6LQ96LI5 555 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ARHGEF35A5YM69 484 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 LRRC10BA6NIK2 292 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 N4BP3O15049 544 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MAFGO15525 162 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 EEF1GP26641 437 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SFNP31947 248 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ERVK-9P63128 1117 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ERVK-24P63145 666 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 LRRC63Q05C16 580 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 TBX2Q13207 712 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 C2orf69Q8N8R5 385 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 KIAA1524Q8TCG1 905 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 BRI3BPQ8WY22 251 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PNMA3Q9UL41 463 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 NFASCO94856 1347 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 TMEM150BA6NC51 233 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SFI1A8K8P3 1242 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SPATA31C2B4DYI2 1134 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 NKRFO15226 690 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 PGK2P07205 417 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 MYBP10242 640 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 CETPP11597 493 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SFPQP23246 707 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 EDNRBP24530 442 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 SP4Q02446 784 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 ZNF746Q6NUN9 644 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 LRRC55Q6ZSA7 311 aa16.44■□□□□ 0.22
CDK5RAP3-218ENST00000580391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms