RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 TYW5A2RUC4 315 aaKnown RBP16.45■□□□□ 0.22
ITGB4-206ENST00000579662 SGK1O00141 431 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 KRT1P04264 644 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 SFNP31947 248 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 TTBK2Q6IQ55 1244 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 CAPS2Q9BXY5 557 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 CCDC68Q9H2F9 335 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 AGLP35573 1532 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 SGO2Q562F6 1265 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 ZBTB33Q86T24 672 aa16.45■□□□□ 0.22
ITGB4-206ENST00000579662 MCF2LO15068 1137 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 CACNB3P54284 484 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.44■□□□□ 0.22
ITGB4-206ENST00000579662 HERC5Q9UII4 1024 aaKnown RBP16.44■□□□□ 0.22
ITGB4-206ENST00000579662 MFAP3LO75121 409 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 SNAP25P60880 206 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 PPP2R5CQ13362 524 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 ATG9AQ7Z3C6 839 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 ZNF512BQ96KM6 892 aaPredicted RBP16.44■□□□□ 0.22
ITGB4-206ENST00000579662 SLC38A10Q9HBR0 1119 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 SLC12A6Q9UHW9 1150 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 ENC1O14682 589 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 ARL4AP40617 200 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 GOLGA8FQ08AF8 430 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 GOLGA8DPQ0D2H9 430 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 MUM1L1Q5H9M0 696 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 MAP3K21Q5TCX8 1036 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 NAA35Q5VZE5 725 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 NEDD1Q8NHV4 660 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 NSUN6Q8TEA1 469 aaKnown RBP16.44■□□□□ 0.22
ITGB4-206ENST00000579662 RAB3IPQ96QF0 476 aaPredicted RBP16.44■□□□□ 0.22
ITGB4-206ENST00000579662 RMDN3Q96TC7 470 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 SOWAHDA6NJG2 315 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 VPS72Q15906 364 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 CRAMP1Q96RY5 1269 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 SCINQ9Y6U3 715 aa16.44■□□□□ 0.22
ITGB4-206ENST00000579662 COPB2P35606 906 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 YWHAGP61981 247 aaKnown RBP eCLIP16.43■□□□□ 0.22
ITGB4-206ENST00000579662 TNFAIP2Q03169 654 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 ARMCX2Q7L311 632 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 RHOT2Q8IXI1 618 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 USP17L10C9JJH3 530 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 NFIXQ14938 502 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 TXNRD1Q16881 649 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 ACRBPQ8NEB7 543 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 DIS3Q9Y2L1 958 aaKnown RBP16.43■□□□□ 0.22
ITGB4-206ENST00000579662 RSRC2Q7L4I2 434 aaKnown RBP16.43■□□□□ 0.22
ITGB4-206ENST00000579662 MAD1L1Q9Y6D9 718 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 SYNJ2BP-COX16A0A087WUM0 186 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 SLFNL1Q499Z3 407 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 PHLDB2Q86SQ0 1253 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 FAM149B1Q96BN6 582 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 COX16Q9P0S2 106 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 CEP72Q9P209 647 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 UBN2Q6ZU65 1347 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 HEXIM1O94992 359 aaKnown RBP16.43■□□□□ 0.22
ITGB4-206ENST00000579662 MOCS3O95396 460 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 PEX3P56589 373 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 EEPD1Q7L9B9 569 aa16.43■□□□□ 0.22
ITGB4-206ENST00000579662 SPATA31A6Q5VVP1 1343 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 BUB1BO60566 1050 aaPredicted RBP16.42■□□□□ 0.22
ITGB4-206ENST00000579662 ARHGAP4P98171 946 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 TBC1D10BQ4KMP7 808 aaPredicted RBP16.42■□□□□ 0.22
ITGB4-206ENST00000579662 NXF1Q9UBU9 619 aaKnown RBP16.42■□□□□ 0.22
ITGB4-206ENST00000579662 PTPN22Q9Y2R2 807 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 GOLGA8SH3BPF8 625 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 INHBAP08476 426 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 PLCB4Q15147 1175 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 SF3B3Q15393 1217 aaKnown RBP16.42■□□□□ 0.22
ITGB4-206ENST00000579662 WRNIP1Q96S55 665 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 RABEP2Q9H5N1 569 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 LRRC4Q9HBW1 653 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 SEL1LQ9UBV2 794 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 PCK1P35558 622 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 ZNF710Q8N1W2 664 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 RNASELQ05823 741 aaKnown RBP16.42■□□□□ 0.22
ITGB4-206ENST00000579662 RPS6KA2Q15349 733 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 ZNF34Q8IZ26 560 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 SCYL1Q96KG9 808 aa16.42■□□□□ 0.22
ITGB4-206ENST00000579662 LGALS16A8MUM7 142 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 GNAT1P11488 350 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 CDC27P30260 824 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
ITGB4-206ENST00000579662 DIP2AQ14689 1571 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 SNAP23O00161 211 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 NMT2O60551 498 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 RFX1P22670 979 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 PADI6Q6TGC4 694 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 PNMA8AQ86V59 439 aaPredicted RBP16.41■□□□□ 0.22
ITGB4-206ENST00000579662 SIX6OS1Q8N1H7 587 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 RAVER2Q9HCJ3 691 aaKnown RBP16.41■□□□□ 0.22
ITGB4-206ENST00000579662 ZHX2Q9Y6X8 837 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 A0A087WWV3 80 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 USP11P51784 963 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 FMR1NBQ8N0W7 255 aaPredicted RBP16.41■□□□□ 0.22
ITGB4-206ENST00000579662 NCAPGQ9BPX3 1015 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 POTEMA6NI47 508 aa16.41■□□□□ 0.22
ITGB4-206ENST00000579662 TRIM42Q8IWZ5 723 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms