RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 NEDD9Q14511 834 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 SYDE2Q5VT97 1194 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 ATL3Q6DD88 541 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 TADA2BQ86TJ2 420 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 MORC1Q86VD1 984 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 TAX1BP1Q86VP1 789 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 PASD1Q8IV76 773 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 MRPL41Q8IXM3 137 aaKnown RBP6.61□□□□□ -1.35
DDX42-210ENST00000579539 BICD2Q8TD16 824 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 MAGEC3Q8TD91 643 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 FBLIM1Q8WUP2 373 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 CACTINQ8WUQ7 758 aaKnown RBP6.61□□□□□ -1.35
DDX42-210ENST00000579539 SSH1Q8WYL5 1049 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 RTF1Q92541 710 aaKnown RBP6.61□□□□□ -1.35
DDX42-210ENST00000579539 SMARCC1Q92922 1105 aaPredicted RBP6.61□□□□□ -1.35
DDX42-210ENST00000579539 SMARCE1Q969G3 411 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 ITFG2Q969R8 447 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 ZNF512BQ96KM6 892 aaPredicted RBP6.61□□□□□ -1.35
DDX42-210ENST00000579539 MFSD14AQ96MC6 490 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 CAMKK2Q96RR4 588 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 TEX13AQ9BXU3 409 aaPredicted RBP6.61□□□□□ -1.35
DDX42-210ENST00000579539 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 ZNF700Q9H0M5 742 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 NUP62CLQ9H1M0 184 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 ZSCAN16Q9H4T2 348 aaPredicted RBP6.61□□□□□ -1.35
DDX42-210ENST00000579539 VIPAS39Q9H9C1 493 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 FBRSQ9HAH7 460 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 VEZTQ9HBM0 779 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 BATF3Q9NR55 127 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 DNAI1Q9UI46 699 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 ZNF180Q9UJW8 692 aa6.61□□□□□ -1.35
DDX42-210ENST00000579539 NOS1P29475 1434 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 NSD2O96028 1365 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 ATXN2Q99700 1313 aaKnown RBP6.6□□□□□ -1.35
DDX42-210ENST00000579539 A0A1B0GUA9 196 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 WDR64B1ANS9 1081 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 MAP2K7O14733 419 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 CHUKO15111 745 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 CLEC3AO75596 197 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 ERLIN2O94905 339 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 ADH5P11766 374 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 RXRBP28702 533 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 OAS2P29728 719 aaKnown RBP6.6□□□□□ -1.35
DDX42-210ENST00000579539 LMAN1P49257 510 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 USP11P51784 963 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 GABREP78334 506 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 KRT85P78386 507 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 ICA1Q05084 483 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 OS9Q13438 667 aaPredicted RBP6.6□□□□□ -1.35
DDX42-210ENST00000579539 NTRK3Q16288 839 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 NKG7Q16617 165 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 ERCC6LQ2NKX8 1250 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 CC2D1AQ6P1N0 951 aaPredicted RBP6.6□□□□□ -1.35
DDX42-210ENST00000579539 SLC4A10Q6U841 1118 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 KSR2Q6VAB6 950 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 GBP6Q6ZN66 633 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 B4GALNT4Q76KP1 1039 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 KIAA1328Q86T90 577 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 TRIM59Q8IWR1 403 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 REXO1L1PQ8IX06 675 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 SHISA5Q8N114 240 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 BVESQ8NE79 360 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 BAHD1Q8TBE0 780 aaPredicted RBP6.6□□□□□ -1.35
DDX42-210ENST00000579539 FAM71BQ8TC56 605 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 BTN2A2Q8WVV5 523 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 TTC1Q99614 292 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 THUMPD2Q9BTF0 503 aaKnown RBP6.6□□□□□ -1.35
DDX42-210ENST00000579539 TNMDQ9H2S6 317 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 GNL3LQ9NVN8 582 aaKnown RBP6.6□□□□□ -1.35
DDX42-210ENST00000579539 LIMCH1Q9UPQ0 1083 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 ZNF451Q9Y4E5 1061 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 TRPM1Q7Z4N2 1603 aa6.6□□□□□ -1.35
DDX42-210ENST00000579539 FAM135BQ49AJ0 1406 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 RPAP1Q9BWH6 1393 aaPredicted RBP6.59□□□□□ -1.35
DDX42-210ENST00000579539 NPHP3Q7Z494 1330 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 CLTCL1P53675 1640 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 FAM95CA0A1B0GW59 222 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 TCRBV16S1A1N1A0A5B0 115 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 EFCAB14O75071 495 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 RFPL1O75677 317 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 F13BP05160 661 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 NBPF7P0C2Y1 421 aaPredicted RBP6.59□□□□□ -1.35
DDX42-210ENST00000579539 ERVK-24P63145 666 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 EXOSC9Q06265 439 aaKnown RBP6.59□□□□□ -1.35
DDX42-210ENST00000579539 TRAF1Q13077 416 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 SLMAPQ14BN4 828 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 SF1Q15637 639 aaKnown RBP6.59□□□□□ -1.35
DDX42-210ENST00000579539 VPS72Q15906 364 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 INTS5Q6P9B9 1019 aaKnown RBP6.59□□□□□ -1.35
DDX42-210ENST00000579539 MICALCLQ6ZW33 695 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 UBE3DQ7Z6J8 389 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 C11orf96Q7Z7L8 435 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 CCDC144CPQ8IYA2 1237 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 NEK11Q8NG66 645 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 PI4K2BQ8TCG2 481 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 EZH1Q92800 747 aaPredicted RBP6.59□□□□□ -1.35
DDX42-210ENST00000579539 USP7Q93009 1102 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 GTF3C6Q969F1 213 aa6.59□□□□□ -1.35
DDX42-210ENST00000579539 SH3GL3Q99963 347 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms