RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 UNC45AQ9H3U1 944 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 RNPEPQ9H4A4 650 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 ZNF302Q9NR11 478 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 NOL7Q9UMY1 257 aaKnown RBP11.33□□□□□ -0.6
MKS1-208ENST00000579358 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
MKS1-208ENST00000579358 IGSF9BQ9UPX0 1349 aa11.33□□□□□ -0.6
MKS1-208ENST00000579358 A0A1W2PPC1 479 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 WNT7AO00755 349 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 BACH1O14867 736 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 BAG4O95429 457 aaKnown RBP11.32□□□□□ -0.6
MKS1-208ENST00000579358 CYP2C9P11712 490 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 MARK3P27448 753 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 ADAM17P78536 824 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 MDM2Q00987 491 aaPredicted RBP11.32□□□□□ -0.6
MKS1-208ENST00000579358 PPFIA1Q13136 1202 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 LARP1BQ659C4 914 aaKnown RBP11.32□□□□□ -0.6
MKS1-208ENST00000579358 MFSD5Q6N075 450 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 SWSAP1Q6NVH7 229 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 PDXDC2PQ6P474 469 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 CHRDL2Q6WN34 429 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 MIER3Q7Z3K6 550 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 SERINC5Q86VE9 423 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 TMEM199Q8N511 208 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 PPP1R13LQ8WUF5 828 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 HAS1Q92839 578 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 BADQ92934 168 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 UIMC1Q96RL1 719 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 DISC1Q9NRI5 854 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 VAV3Q9UKW4 847 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 SAMM50Q9Y512 469 aa11.32□□□□□ -0.6
MKS1-208ENST00000579358 TNRC18O15417 2968 aaPredicted RBP11.32□□□□□ -0.6
MKS1-208ENST00000579358 MYH7BA7E2Y1 1941 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 RRN3P2A6NIE6 340 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 CHMP2AO43633 222 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 MARCH6O60337 910 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 HBP1O60381 514 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 CAND2O75155 1236 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 FPGSQ05932 587 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 HIC1Q14526 733 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 PLCB4Q15147 1175 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 GRIK4Q16099 956 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 CALCRLQ16602 461 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 TTC38Q5R3I4 469 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 MCTP1Q6DN14 999 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 ATP8B4Q8TF62 1192 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 LMBR1Q8WVP7 490 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 DHX38Q92620 1227 aaKnown RBP11.31□□□□□ -0.6
MKS1-208ENST00000579358 ATP6V0A1Q93050 837 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 GJA10Q969M2 543 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 FAM167AQ96KS9 214 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 MTMR9Q96QG7 549 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 SETD4Q9NVD3 440 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 GABBR1Q9UBS5 961 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 TRPC6Q9Y210 931 aa11.31□□□□□ -0.6
MKS1-208ENST00000579358 COL1A2P08123 1366 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 MBLAC1A4D2B0 266 aaPredicted RBP11.3□□□□□ -0.6
MKS1-208ENST00000579358 TREHO43280 583 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
MKS1-208ENST00000579358 RPLP2P05387 115 aaKnown RBP11.3□□□□□ -0.6
MKS1-208ENST00000579358 INSRRP14616 1297 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 CYP2C18P33260 490 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 MCM7P33993 719 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 RFC2P35250 354 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 ZNF200P98182 395 aaPredicted RBP11.3□□□□□ -0.6
MKS1-208ENST00000579358 SPIRE1Q08AE8 756 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 PPIGQ13427 754 aaKnown RBP eCLIP11.3□□□□□ -0.6
MKS1-208ENST00000579358 TRIM71Q2Q1W2 868 aaKnown RBP11.3□□□□□ -0.6
MKS1-208ENST00000579358 RILPL1Q5EBL4 403 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 TAF2Q6P1X5 1199 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 BRAPQ7Z569 592 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 RPAINQ86UA6 219 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 CKAP2LQ8IYA6 745 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 RETREG2Q8NC44 543 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
MKS1-208ENST00000579358 UBE2OQ9C0C9 1292 aaKnown RBP11.3□□□□□ -0.6
MKS1-208ENST00000579358 WNT8AQ9H1J5 351 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 TUBE1Q9UJT0 475 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 COLQQ9Y215 455 aaPredicted RBP11.3□□□□□ -0.6
MKS1-208ENST00000579358 UMODL1Q5DID0 1318 aa11.3□□□□□ -0.6
MKS1-208ENST00000579358 ZNF862O60290 1169 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 DKC1O60832 514 aaKnown RBP eCLIP11.29□□□□□ -0.6
MKS1-208ENST00000579358 PFKMP08237 780 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 OR52Z1P0C646 297 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 IQCF3P0C7M6 154 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 CKBP12277 381 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 PDIA4P13667 645 aaKnown RBP11.29□□□□□ -0.6
MKS1-208ENST00000579358 ATP2B1P20020 1258 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 ATP4AP20648 1035 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 TOB1P50616 345 aaPredicted RBP11.29□□□□□ -0.6
MKS1-208ENST00000579358 PRKCEQ02156 737 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 EPHA7Q15375 998 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 ZNF484Q5JVG2 852 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 MARCH8Q5T0T0 291 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 NEK9Q8TD19 979 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 TMEM60Q9H2L4 133 aa11.29□□□□□ -0.6
MKS1-208ENST00000579358 TTC12Q9H892 705 aaPredicted RBP11.29□□□□□ -0.6
MKS1-208ENST00000579358 PCDHA12Q9UN75 941 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms