RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 DKC1O60832 514 aaKnown RBP eCLIP17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 P4HBP07237 508 aaKnown RBP17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 CEBPZQ03701 1054 aaKnown RBP17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 PTPN11Q06124 597 aaPredicted RBP17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 SPIRE1Q08AE8 756 aa17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 C1orf53Q5VUE5 145 aa17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 NFRKBQ6P4R8 1299 aa17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 C7orf31Q8N865 590 aa17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 SLC43A3Q8NBI5 491 aa17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 USP28Q96RU2 1077 aa17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 CFAP45Q9UL16 551 aa17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 CIZ1Q9ULV3 898 aaPredicted RBP17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 MAFBQ9Y5Q3 323 aaPredicted RBP17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 STK24Q9Y6E0 443 aa17.5■□□□□ 0.39
SLC6A4-205ENST00000579221 CDK7P50613 346 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 PTPAQ15257 358 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 FOXD4L6Q3SYB3 417 aaPredicted RBP17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 FAM47CQ5HY64 1035 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 FOXD4L3Q6VB84 417 aaPredicted RBP17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 TRIM50Q86XT4 487 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 CCDC60Q8IWA6 550 aaPredicted RBP17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 CKAP2LQ8IYA6 745 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 ERMNQ8TAM6 284 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 ATP6V0A1Q93050 837 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 RNPEPQ9H4A4 650 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 NRBP2Q9NSY0 501 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 LRWD1Q9UFC0 647 aa17.49■□□□□ 0.39
SLC6A4-205ENST00000579221 GRIN2DO15399 1336 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 MROH7Q68CQ1 1323 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 MARK3P27448 753 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 QARSP47897 775 aaKnown RBP17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 RGS19P49795 217 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 PSMC5P62195 406 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 SNX17Q15036 470 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 SLC39A14Q15043 492 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 STK38Q15208 465 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 LRRC26Q2I0M4 334 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 NEK9Q8TD19 979 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 EIF2AK1Q9BQI3 630 aaKnown RBP17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 FTOQ9C0B1 505 aaKnown RBP eCLIP17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 HDAC6Q9UBN7 1215 aa17.48■□□□□ 0.39
SLC6A4-205ENST00000579221 POTEB3A0JP26 581 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 VWA3AA6NCI4 1184 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 DCDC2CA8MYV0 355 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 TLR3O15455 904 aaKnown RBP17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 HBP1O60381 514 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 YEATS4O95619 227 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 GNAT1P11488 350 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 RTP1P59025 263 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 DNM1Q05193 864 aaKnown RBP17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 PLCB4Q15147 1175 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 IL17AQ16552 155 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 POTEBQ6S5H4 581 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 SESTD1Q86VW0 696 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 IGSF22Q8N9C0 903 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 LINC00301Q8NCQ3 95 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 DYDC2Q96IM9 177 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 FAM167AQ96KS9 214 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 TOX2Q96NM4 488 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 CHMP5Q9NZZ3 219 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 TRPC6Q9Y210 931 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 ATP11BQ9Y2G3 1177 aa17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 MORC2Q9Y6X9 1032 aaPredicted RBP17.47■□□□□ 0.39
SLC6A4-205ENST00000579221 KIAA0100Q14667 2235 aaKnown RBP17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 POTEMA6NI47 508 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 RRN3P2A6NIE6 340 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 SLITRK3O94933 977 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 ATP4AP20648 1035 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 MARCKSP29966 332 aaPredicted RBP17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 TRIM60Q495X7 471 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 ANKRD33Q7Z3H0 272 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 TPH2Q8IWU9 490 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 BANK1Q8NDB2 785 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 ATP8B4Q8TF62 1192 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 BBXQ8WY36 941 aaPredicted RBP17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 DPF3Q92784 378 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 HSD17B14Q9BPX1 270 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 ZSWIM4Q9H7M6 989 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 TUFT1Q9NNX1 390 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 RGL1Q9NZL6 768 aa17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 SRPRBQ9Y5M8 271 aaKnown RBP17.46■□□□□ 0.39
SLC6A4-205ENST00000579221 DOCK5Q9H7D0 1870 aa17.46■□□□□ 0.38
SLC6A4-205ENST00000579221 NRCAMQ92823 1304 aa17.46■□□□□ 0.38
SLC6A4-205ENST00000579221 IGSF9BQ9UPX0 1349 aa17.46■□□□□ 0.38
SLC6A4-205ENST00000579221 CENPFP49454 3210 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 C17orf102A2RUQ5 167 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 DDX11L8A8MPP1 907 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 SPTLC2O15270 562 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 KRT85P78386 507 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 TLE2Q04725 743 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 CTTNQ14247 550 aaKnown RBP17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 UGCGQ16739 394 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 XKR3Q5GH77 459 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 ZNF484Q5JVG2 852 aa17.45■□□□□ 0.38
SLC6A4-205ENST00000579221 KRT79Q5XKE5 535 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms