RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 PCDHA10Q9Y5I2 948 aa13.63□□□□□ -0.23
IFT20-207ENST00000578547 PRPF40AO75400 957 aaKnown RBP13.62□□□□□ -0.23
IFT20-207ENST00000578547 LGALS2P05162 132 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 MARK3P27448 753 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 TXLNAP40222 546 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 CCT6AP40227 531 aaKnown RBP13.62□□□□□ -0.23
IFT20-207ENST00000578547 UBA7P41226 1012 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
IFT20-207ENST00000578547 CTTNQ14247 550 aaKnown RBP13.62□□□□□ -0.23
IFT20-207ENST00000578547 KCNA10Q16322 511 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 UGCGQ16739 394 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 FAM160B1Q5W0V3 765 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 HAUS3Q68CZ6 603 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 SHC4Q6S5L8 630 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 USP49Q70CQ1 688 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 TRMT1LQ7Z2T5 733 aaKnown RBP13.62□□□□□ -0.23
IFT20-207ENST00000578547 CABP7Q86V35 215 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 GLG1Q92896 1179 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 EPSTI1Q96J88 318 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 LXNQ9BS40 222 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 AZI2Q9H6S1 392 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 ZNF302Q9NR11 478 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 RGL1Q9NZL6 768 aa13.62□□□□□ -0.23
IFT20-207ENST00000578547 POTEB3A0JP26 581 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 KBTBD13C9JR72 458 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 GOLGA6L22H0YM25 854 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 ZEB2O60315 1214 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 MED24O75448 989 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 ATG7O95352 703 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 CST5P28325 142 aaPredicted RBP13.61□□□□□ -0.23
IFT20-207ENST00000578547 PDXDC2PQ6P474 469 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 POTEBQ6S5H4 581 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 TPH2Q8IWU9 490 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 CKAP2LQ8IYA6 745 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
IFT20-207ENST00000578547 TMEM87AQ8NBN3 555 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 NEK9Q8TD19 979 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 PLIN2Q99541 437 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 MMTAG2Q9BU76 263 aaKnown RBP13.61□□□□□ -0.23
IFT20-207ENST00000578547 EMSYQ7Z589 1322 aa13.61□□□□□ -0.23
IFT20-207ENST00000578547 GADD45BO75293 160 aaPredicted RBP13.6□□□□□ -0.23
IFT20-207ENST00000578547 PPFIA4O75335 1185 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 P4HBP07237 508 aaKnown RBP13.6□□□□□ -0.23
IFT20-207ENST00000578547 ASGR1P07306 291 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 HOXD8P13378 290 aaPredicted RBP13.6□□□□□ -0.23
IFT20-207ENST00000578547 QARSP47897 775 aaKnown RBP13.6□□□□□ -0.23
IFT20-207ENST00000578547 STAT5BP51692 787 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 SOX10P56693 466 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 PRKCEQ02156 737 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 KARSQ15046 597 aaKnown RBP13.6□□□□□ -0.23
IFT20-207ENST00000578547 RESP18Q5W5W9 173 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 ADALQ6DHV7 355 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 CXCL17Q6UXB2 119 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 CATSPER3Q86XQ3 398 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 PDILTQ8N807 584 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 FSIP1Q8NA03 581 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 PCSK9Q8NBP7 692 aaKnown RBP13.6□□□□□ -0.23
IFT20-207ENST00000578547 DIS3LQ8TF46 1054 aaKnown RBP13.6□□□□□ -0.23
IFT20-207ENST00000578547 ATP6V0A1Q93050 837 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 CALML4Q96GE6 196 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 PCYT2Q99447 389 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 TSEN34Q9BSV6 310 aaKnown RBP13.6□□□□□ -0.23
IFT20-207ENST00000578547 PANK2Q9BZ23 570 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 SMARCAD1Q9H4L7 1026 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 FAM13BQ9NYF5 915 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 ZNF215Q9UL58 517 aaPredicted RBP13.6□□□□□ -0.23
IFT20-207ENST00000578547 STK24Q9Y6E0 443 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 IGSF9BQ9UPX0 1349 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 KDM3AQ9Y4C1 1321 aa13.6□□□□□ -0.23
IFT20-207ENST00000578547 A0A087WWV3 80 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 IGKV6D-21A0A0A0MT36 114 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 A0A1B0GVL5 298 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 DNM1LO00429 736 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 LGR5O75473 907 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 SPATA31C1P0DKV0 1188 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 PFKFB1P16118 471 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 CMA1P23946 247 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 RPA1P27694 616 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 ACLYP53396 1101 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 PSMC5P62195 406 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 PURAQ00577 322 aaKnown RBP13.59□□□□□ -0.23
IFT20-207ENST00000578547 PPP1R13LQ8WUF5 828 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
IFT20-207ENST00000578547 HSD17B14Q9BPX1 270 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 C16orf70Q9BSU1 422 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 MTG1Q9BT17 334 aaPredicted RBP13.59□□□□□ -0.23
IFT20-207ENST00000578547 POLR3CQ9BUI4 534 aaPredicted RBP13.59□□□□□ -0.23
IFT20-207ENST00000578547 ZSWIM4Q9H7M6 989 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 TUFT1Q9NNX1 390 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 DDX19AQ9NUU7 478 aaKnown RBP13.59□□□□□ -0.23
IFT20-207ENST00000578547 ERAP1Q9NZ08 941 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 WRAP73Q9P2S5 460 aaPredicted RBP13.59□□□□□ -0.23
IFT20-207ENST00000578547 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 PHF24Q9UPV7 400 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 KIAA1024Q9UPX6 916 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 TRPC6Q9Y210 931 aa13.59□□□□□ -0.23
IFT20-207ENST00000578547 A0A1W2PQ27 194 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms