RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 GANQ9H2C0 597 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 VCPKMTQ9H867 229 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MLXIPQ9HAP2 919 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ST7Q9NRC1 585 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 HDAC6Q9UBN7 1215 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RABGAP1Q9Y3P9 1069 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TARSL2A2RTX5 802 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EML1O00423 815 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PSMD10O75832 226 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RAD17O75943 681 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MOCS3O95396 460 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PRLRP16471 622 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 NR2F2P24468 414 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 OAS2P29728 719 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EPS15P42566 896 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PRELPP51888 382 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 VSNL1P62760 191 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PPP2R5CQ13362 524 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ASIC2Q16515 512 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TDRD12Q587J7 1177 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 IQCEQ6IPM2 695 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CCDC174Q6PII3 467 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ZNF771Q7L3S4 317 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 HDXQ7Z353 690 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 LARGE2Q8N3Y3 721 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TTLL6Q8N841 843 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MTMR14Q8NCE2 650 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CAGE1Q8TC20 777 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MMS19Q96T76 1030 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 WDR18Q9BV38 432 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RUSC1Q9BVN2 902 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 VPS33BQ9H267 617 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ABCB6Q9NP58 842 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 NLRC4Q9NPP4 1024 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 LUC7LQ9NQ29 371 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TYW1Q9NV66 732 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FEM1BQ9UK73 627 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SNX12Q9UMY4 172 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 JRKLQ9Y4A0 524 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 HYOU1Q9Y4L1 999 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 UBE4BO95155 1302 aa10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RBBP6Q7Z6E9 1792 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EIF3DO15371 548 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SRGAP2O75044 1071 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EIF3JO75822 258 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PRPF6O94906 941 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FAM13AO94988 1023 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CFBP00751 764 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 AFPP02771 609 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MYBP10242 640 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ERCC3P19447 782 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RPL13P26373 211 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CASP5P51878 434 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 POLR2FP61218 127 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CYP4A11Q02928 519 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 KCNH2Q12809 1159 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RAPGEF1Q13905 1077 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SMC1AQ14683 1233 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EZH2Q15910 746 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 LRCH2Q5VUJ6 765 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ZNF572Q7Z3I7 529 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FAM83AQ86UY5 434 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RNF10Q8N5U6 811 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 AGBL3Q8NEM8 1001 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CYP2W1Q8TAV3 490 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 DYDC2Q96IM9 177 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CAPZA3Q96KX2 299 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CAMKK2Q96RR4 588 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 BHMT2Q9H2M3 363 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 METTL14Q9HCE5 456 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PLCB1Q9NQ66 1216 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 OLFML3Q9NRN5 406 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RGL1Q9NZL6 768 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ARMCX3Q9UH62 379 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PRDM4Q9UKN5 801 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 L1RE1Q9UN81 338 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CAPN6Q9Y6Q1 641 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 DUSP10Q9Y6W6 482 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ASTN1O14525 1302 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 COL4A5P29400 1685 aa10.28□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RSPH10B2B2RC85 870 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 TLR2O60603 784 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 NR3C1P04150 777 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 RSPH10BP0C881 870 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 EPB41P11171 864 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 TCP1P17987 556 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 HOXD13P35453 343 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CAP2P40123 477 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 SETQ01105 290 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 ITIH3Q06033 890 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 GFPT1Q06210 699 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 GPS2Q13227 327 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 CTTNQ14247 550 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 EPHA7Q15375 998 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 NFIL3Q16649 462 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 MAP9Q49MG5 647 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 RINT1Q6NUQ1 792 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 OTOP1Q7RTM1 612 aa10.27□□□□□ -0.77
CDK5RAP3-208ENST00000578525 NIM1KQ8IY84 436 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms