RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 AGO4Q9HCK5 861 aaKnown RBP12.31□□□□□ -0.44
SKA2-204ENST00000578519 PXMP2Q9NR77 195 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 KCNH7Q9NS40 1196 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 SCAF8Q9UPN6 1271 aaKnown RBP12.31□□□□□ -0.44
SKA2-204ENST00000578519 SSUH2Q9Y2M2 353 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 SAMM50Q9Y512 469 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 A0A1W2PQJ5 194 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 UNCXA6NJT0 531 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 PDXKO00764 312 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 DYNC1I1O14576 645 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 CHMP2AO43633 222 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 GRIN3BO60391 1043 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 LYPLA2O95372 231 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 IPO7O95373 1038 aaKnown RBP12.3□□□□□ -0.44
SKA2-204ENST00000578519 ARP10275 920 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 MAPTP10636 758 aaKnown RBP12.3□□□□□ -0.44
SKA2-204ENST00000578519 MYCLP12524 364 aaPredicted RBP12.3□□□□□ -0.44
SKA2-204ENST00000578519 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
SKA2-204ENST00000578519 CASP14P31944 242 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 ABCD1P33897 745 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 KRT9P35527 623 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 PMS1P54277 932 aaKnown RBP12.3□□□□□ -0.44
SKA2-204ENST00000578519 UBXN2AP68543 259 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 CYP4A11Q02928 519 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 KNOP1Q1ED39 458 aaKnown RBP12.3□□□□□ -0.44
SKA2-204ENST00000578519 RINT1Q6NUQ1 792 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 OTUD6AQ7L8S5 288 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 ERO1BQ86YB8 467 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 IRF2BP1Q8IU81 584 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 DNERQ8NFT8 737 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 MYRIPQ8NFW9 859 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 CYP2W1Q8TAV3 490 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 ZNF507Q8TCN5 953 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 GJA10Q969M2 543 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 TAAR1Q96RJ0 339 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 PDCD2LQ9BRP1 358 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 UNC45AQ9H3U1 944 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 MRPL44Q9H9J2 332 aaKnown RBP12.3□□□□□ -0.44
SKA2-204ENST00000578519 PARVGQ9HBI0 331 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 OLFML3Q9NRN5 406 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 HOMER2Q9NSB8 354 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 TRMT1Q9NXH9 659 aaKnown RBP12.3□□□□□ -0.44
SKA2-204ENST00000578519 DBR1Q9UK59 544 aaKnown RBP12.3□□□□□ -0.44
SKA2-204ENST00000578519 CAPN11Q9UMQ6 739 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 PFASO15067 1338 aa12.3□□□□□ -0.44
SKA2-204ENST00000578519 DOCK1Q14185 1865 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 WDR64B1ANS9 1081 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 EML1O00423 815 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 COBLO75128 1261 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 EIF2AK2P19525 551 aaKnown RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 OSBPP22059 807 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 GUCY2CP25092 1073 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 CYLC1P35663 651 aaPredicted RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 QARSP47897 775 aaKnown RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 ZBED6P86452 979 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 ADAM9Q13443 819 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 BAATQ14032 418 aaPredicted RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 TTLL12Q14166 644 aaPredicted RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 CTTNQ14247 550 aaKnown RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 ARSHQ5FYA8 562 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 MUM1L1Q5H9M0 696 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 PRAMEF18Q5VWM3 479 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 E4F1Q66K89 784 aaPredicted RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 ZNF746Q6NUN9 644 aaPredicted RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 B3GNT9Q6UX72 402 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 NYAP1Q6ZVC0 841 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 FASTKD5Q7L8L6 764 aaKnown RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 MYCT1Q8N699 235 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 GTF3C2Q8WUA4 911 aaPredicted RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 PPP1R13BQ96KQ4 1090 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 SENP7Q9BQF6 1050 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 ANKEF1Q9NU02 776 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 TYW1Q9NV66 732 aaKnown RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 RGL1Q9NZL6 768 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 LARSQ9P2J5 1176 aaKnown RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 CGNQ9P2M7 1197 aaKnown RBP12.29□□□□□ -0.44
SKA2-204ENST00000578519 TRAF3IP3Q9Y228 551 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 PPP2R2CQ9Y2T4 447 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
SKA2-204ENST00000578519 UQCRHLA0A096LP55 91 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 SLC25A27O95847 323 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 UQCRHP07919 91 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 NR3C2P08235 984 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 TAL1P17542 331 aaPredicted RBP12.28□□□□□ -0.44
SKA2-204ENST00000578519 ITGB5P18084 799 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 FECHP22830 423 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 MARSP56192 900 aaKnown RBP12.28□□□□□ -0.44
SKA2-204ENST00000578519 PSMC5P62195 406 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 SNRPFP62306 86 aaKnown RBP12.28□□□□□ -0.44
SKA2-204ENST00000578519 PSMC6P62333 389 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 KRT83P78385 493 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
SKA2-204ENST00000578519 TUBB2AQ13885 445 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 HSP90AA2PQ14568 343 aaPredicted RBP12.28□□□□□ -0.44
SKA2-204ENST00000578519 PLS1Q14651 629 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms