RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 DDX12PQ92771 950 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 CDHR1Q96JP9 859 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 JPH1Q9HDC5 661 aaPredicted RBP14.65□□□□□ -0.06
CTC1-203ENST00000578240 RNF186Q9NXI6 227 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 STK24Q9Y6E0 443 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 LOC102724159A0A0B4J2E5 919 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 NPHP3-ACAD11A0A0J9YXS1 232 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 PPP1R3GB7ZBB8 358 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 STRNO43815 780 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 SORBS3O60504 671 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 CAPN15O75808 1086 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 FARP2O94887 1054 aaPredicted RBP14.65□□□□□ -0.06
CTC1-203ENST00000578240 EYA4O95677 639 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 MUTP22033 750 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 MAPK4P31152 587 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 ASIC1P78348 528 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 PWP2Q15269 919 aaKnown RBP14.65□□□□□ -0.06
CTC1-203ENST00000578240 MORN1Q5T089 497 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 TMEM63BQ5T3F8 832 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 DYMQ7RTS9 669 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 PLEKHH3Q7Z736 793 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 GPBP1Q86WP2 473 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 TPH2Q8IWU9 490 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 SYT2Q8N9I0 419 aaPredicted RBP14.65□□□□□ -0.06
CTC1-203ENST00000578240 NPLOC4Q8TAT6 608 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 PIGOQ8TEQ8 1089 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 HPS3Q969F9 1004 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 RUSC1Q9BVN2 902 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 BHMT2Q9H2M3 363 aa14.65□□□□□ -0.06
CTC1-203ENST00000578240 SYNGAP1Q96PV0 1343 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 IGSF9BQ9UPX0 1349 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 FRMD3A2A2Y4 597 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 WDR64B1ANS9 1081 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 TRPA1O75762 1119 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 PTGS1P23219 599 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 JAK3P52333 1124 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 ZNF658Q5TYW1 1059 aaPredicted RBP14.64□□□□□ -0.07
CTC1-203ENST00000578240 CCDC62Q6P9F0 684 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 ZNF467Q7Z7K2 595 aaPredicted RBP14.64□□□□□ -0.07
CTC1-203ENST00000578240 KIAA0895Q8NCT3 520 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 SLC9A2Q9UBY0 812 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 IVNS1ABPQ9Y6Y0 642 aa14.64□□□□□ -0.07
CTC1-203ENST00000578240 BRCA2P51587 3418 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 TMEM150BA6NC51 233 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 ZNF862O60290 1169 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 STBD1O95210 358 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 LYPLA2O95372 231 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 P4HBP07237 508 aaKnown RBP14.63□□□□□ -0.07
CTC1-203ENST00000578240 SFNP31947 248 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 ACTR2P61160 394 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 CAP1Q01518 475 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
CTC1-203ENST00000578240 UVSSAQ2YD98 709 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 MAMDC4Q6UXC1 1216 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 UNC13DQ70J99 1090 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 CYFIP1Q7L576 1253 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 CCDC60Q8IWA6 550 aaPredicted RBP14.63□□□□□ -0.07
CTC1-203ENST00000578240 TRMT44Q8IYL2 757 aaKnown RBP14.63□□□□□ -0.07
CTC1-203ENST00000578240 KCTD17Q8N5Z5 321 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 MLKLQ8NB16 471 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 GIMAP8Q8ND71 665 aaPredicted RBP14.63□□□□□ -0.07
CTC1-203ENST00000578240 RDM1Q8NG50 284 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 USP6NLQ92738 828 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 MAML3Q96JK9 1138 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 FGFBP2Q9BYJ0 223 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 PDGFCQ9NRA1 345 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 DNM3Q9UQ16 869 aa14.63□□□□□ -0.07
CTC1-203ENST00000578240 SLC15A5A6NIM6 579 aa14.62□□□□□ -0.07
CTC1-203ENST00000578240 ECM2O94769 699 aaPredicted RBP14.62□□□□□ -0.07
CTC1-203ENST00000578240 SNAI1O95863 264 aaPredicted RBP14.62□□□□□ -0.07
CTC1-203ENST00000578240 SSBP05455 408 aaKnown RBP eCLIP14.62□□□□□ -0.07
CTC1-203ENST00000578240 AMPD3Q01432 767 aa14.62□□□□□ -0.07
CTC1-203ENST00000578240 STK4Q13043 487 aa14.62□□□□□ -0.07
CTC1-203ENST00000578240 COASYQ13057 564 aa14.62□□□□□ -0.07
CTC1-203ENST00000578240 LY6KQ17RY6 165 aa14.62□□□□□ -0.07
CTC1-203ENST00000578240 TAPT1Q6NXT6 567 aa14.62□□□□□ -0.07
CTC1-203ENST00000578240 ABHD15Q6UXT9 468 aa14.62□□□□□ -0.07
CTC1-203ENST00000578240 SMAP1Q8IYB5 467 aaPredicted RBP14.62□□□□□ -0.07
CTC1-203ENST00000578240 GLIS3Q8NEA6 775 aa14.62□□□□□ -0.07
CTC1-203ENST00000578240 REEP2Q9BRK0 252 aa14.62□□□□□ -0.07
CTC1-203ENST00000578240 DDX41Q9UJV9 622 aaKnown RBP14.62□□□□□ -0.07
CTC1-203ENST00000578240 TRIP12Q14669 1992 aaPredicted RBP14.62□□□□□ -0.07
CTC1-203ENST00000578240 PVALEFA0A1B0GWK0 134 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 ASB14A6NK59 587 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 RSPH10B2B2RC85 870 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 IKBKBO14920 756 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 ATG7O95352 703 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 IGHA2P01877 340 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 RSPH10BP0C881 870 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 PRCPP42785 496 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 QARSP47897 775 aaKnown RBP14.61□□□□□ -0.07
CTC1-203ENST00000578240 SP4Q02446 784 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 RAD51AP2Q09MP3 1159 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 GIT2Q14161 759 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 RINT1Q6NUQ1 792 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 C1orf186Q6ZWK4 172 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 PCYT2Q99447 389 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 ZSWIM4Q9H7M6 989 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 ZFYVE28Q9HCC9 887 aa14.61□□□□□ -0.07
CTC1-203ENST00000578240 RMND1Q9NWS8 449 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms