RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 LINC01599Q8WXQ3 324 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 ZFP91Q96JP5 570 aaPredicted RBP16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 S1PR5Q9H228 398 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 BCAS3Q9H6U6 928 aa16.41■□□□□ 0.22
PPP4R1-206ENST00000577779 CCND2P30279 289 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 TECP42680 631 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 UBE3AQ05086 875 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 MGAT3Q09327 533 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 ALX1Q15699 326 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 FBXO47Q5MNV8 452 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 ANKRD54Q6NXT1 300 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 TAF2Q6P1X5 1199 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 TSHZ1Q6ZSZ6 1077 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 STOX1Q6ZVD7 989 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 NRCAMQ92823 1304 aa16.4■□□□□ 0.22
PPP4R1-206ENST00000577779 OPLAHO14841 1288 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 STAG3L1P0CL83 205 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 CD52P31358 61 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 CLCN5P51795 746 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 UTP14CQ5TAP6 766 aaKnown RBP16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 CYFIP1Q7L576 1253 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 MIER1Q8N108 512 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 CRIPAKQ8N1N5 446 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 GPR20Q99678 358 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 SMOC2Q9H3U7 446 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 PCDHB12Q9Y5F1 795 aa16.39■□□□□ 0.21
PPP4R1-206ENST00000577779 DOCK5Q9H7D0 1870 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 FGAP02671 866 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 HOXA13P31271 388 aaPredicted RBP16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 GATMP50440 423 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 ERVFC1P60507 584 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 GHRHRQ02643 423 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 SPOUT1Q5T280 376 aaKnown RBP16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 LLGL2Q6P1M3 1020 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 SYCE2Q6PIF2 218 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 METTL7BQ6UX53 244 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 TMEM184AQ6ZMB5 413 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 RTN4RL1Q86UN2 441 aaPredicted RBP16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 KCNG4Q8TDN1 519 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 ZKSCAN3Q9BRR0 538 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 FTHL17Q9BXU8 183 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 JMJD4Q9H9V9 463 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 CDY2AQ9Y6F7 541 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 TTC41PQ6P2S7 1318 aa16.38■□□□□ 0.21
PPP4R1-206ENST00000577779 C2CD4DB7Z1M9 353 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 HAND2P61296 217 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 NEDD9Q14511 834 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 ASPRV1Q53RT3 343 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 PDE12Q6L8Q7 609 aaKnown RBP16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 MFSD6Q6ZSS7 791 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 FLCNQ8NFG4 579 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 DNAJB3Q8WWF6 145 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 AMNQ9BXJ7 453 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 AGO3Q9H9G7 860 aaKnown RBP16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 AAASQ9NRG9 546 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 MAP3K20Q9NYL2 800 aaKnown RBP16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 LRFN2Q9ULH4 789 aa16.37■□□□□ 0.21
PPP4R1-206ENST00000577779 OTOGLQ3ZCN5 2332 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 FGF18O76093 207 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 SCG2P13521 617 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 HOXB8P17481 243 aaPredicted RBP16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 IBSPP21815 317 aaPredicted RBP16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 SP4Q02446 784 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 KCNC3Q14003 757 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 GNPTABQ3T906 1256 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 DGKHQ86XP1 1220 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 KIAA2013Q8IYS2 634 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 PI4K2BQ8TCG2 481 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 CNTNAP3BQ96NU0 1288 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 CNTNAP3Q9BZ76 1288 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 TMEM260Q9NX78 707 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 CDH22Q9UJ99 828 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 TUBE1Q9UJT0 475 aa16.36■□□□□ 0.21
PPP4R1-206ENST00000577779 MAP1BP46821 2468 aaKnown RBP16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 FSCN2O14926 492 aa16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 ASGR2P07307 311 aa16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 MRPS6P82932 125 aaKnown RBP16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 PPFIA1Q13136 1202 aa16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 PUM1Q14671 1186 aaKnown RBP eCLIP16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 ANGPT1Q15389 498 aa16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 PLPP4Q5VZY2 271 aa16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 THNSL1Q8IYQ7 743 aa16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 RASGRP4Q8TDF6 673 aa16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 POMKQ9H5K3 350 aa16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 TELO2Q9Y4R8 837 aa16.35■□□□□ 0.21
PPP4R1-206ENST00000577779 BAHCC1Q9P281 2608 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 LMNAP02545 664 aaKnown RBP16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 PARP1P09874 1014 aaKnown RBP16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 PCP11498 1178 aaKnown RBP16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 APOBRQ0VD83 1088 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 GRIK4Q16099 956 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 TPRNQ4KMQ1 711 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 CES5AQ6NT32 575 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 FCHSD1Q86WN1 690 aa16.34■□□□□ 0.21
PPP4R1-206ENST00000577779 CCDC105Q8IYK2 499 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms