RNA–Protein interactions for RNA: ENST00000576346.5

NSF-208, Transcript of N-ethylmaleimide sensitive factor, vesicle fusing ATPase, human

TSL 4

Gene NSF, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSF-208	ENST00000576346	MSL3	Q8N5Y2	521 aa	Known RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	TMEM102	Q8N9M5	508 aa	Predicted RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	SPATA5	Q8NB90	893 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	TTLL11	Q8NHH1	800 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	IGDCC4	Q8TDY8	1250 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	GOLGA1	Q92805	767 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	TP53INP1	Q96A56	240 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	IQCD	Q96DY2	449 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	GSDMA	Q96QA5	445 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	STRBP	Q96SI9	672 aa	Known RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	MAP3K14	Q99558	947 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	BAG1	Q99933	345 aa	Predicted RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	ZKSCAN3	Q9BRR0	538 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	SLC26A6	Q9BXS9	759 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	BCO2	Q9BYV7	579 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	PUS3	Q9BZE2	481 aa	Known RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	PUS7L	Q9H0K6	701 aa	Known RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	TSPYL1	Q9H0U9	437 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	MUC3B	Q9H195	1237 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	RASSF4	Q9H2L5	321 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	MAGEF1	Q9HAY2	307 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	KIAA1551	Q9HCM1	1747 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	GNL3L	Q9NVN8	582 aa	Known RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	DZANK1	Q9NVP4	752 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	AATF	Q9NY61	560 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	RAI14	Q9P0K7	980 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	VTI1B	Q9UEU0	232 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	TRMT112	Q9UI30	125 aa	Known RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	TTF2	Q9UNY4	1162 aa	Known RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	SRPRB	Q9Y5M8	271 aa	Known RBP	4.25	□□□□□ -1.73
NSF-208	ENST00000576346	AK5	Q9Y6K8	562 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	SCN7A	Q01118	1682 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	SLIT2	O94813	1529 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	CACNA1G	O43497	2377 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	MYH6	P13533	1939 aa		4.25	□□□□□ -1.73
NSF-208	ENST00000576346	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	DOT1L	Q8TEK3	1739 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	TRIM75P	A6NK02	468 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	USP27X	A6NNY8	438 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346		B4E1Z4	1266 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	BIN1	O00499	593 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	KIF5C	O60282	957 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	ERLIN1	O75477	346 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	TADA3	O75528	432 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	EIF3J	O75822	258 aa	Known RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	MBD4	O95243	580 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	CCDC175	P0C221	793 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	SLFN14	P0C7P3	912 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	XRCC5	P13010	732 aa	Known RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	ZNF18	P17022	549 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	CDK11B	P21127	795 aa	Known RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	FGFR2	P21802	821 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	CALML3	P27482	149 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	NOS3	P29474	1203 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	GSTT1	P30711	240 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	CASQ1	P31415	396 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	KIF5B	P33176	963 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	KRT2	P35908	639 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	DAB2	P98082	770 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	ATP11A	P98196	1134 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	STIM1	Q13586	685 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	MORC3	Q14149	939 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	NTRK3	Q16288	839 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	HABP4	Q5JVS0	413 aa	Known RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	SPATA1	Q5VX52	437 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	MSL1	Q68DK7	614 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	FBXO38	Q6PIJ6	1188 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	SYT10	Q6XYQ8	523 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	DTHD1	Q6ZMT9	781 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	CHST3	Q7LGC8	479 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	TMC4	Q7Z404	712 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	CATIP	Q7Z7H3	387 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	METTL16	Q86W50	562 aa	Known RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	PPFIBP1	Q86W92	1011 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	WFDC8	Q8IUA0	241 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	ZNF654	Q8IZM8	581 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	TXLNB	Q8N3L3	684 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	CEP112	Q8N8E3	955 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	SPATA20	Q8TB22	786 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	WFDC12	Q8WWY7	111 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	RUBCN	Q92622	972 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	RABGGTA	Q92696	567 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	JARID2	Q92833	1246 aa	Predicted RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	NXPE3	Q969Y0	559 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	LPIN3	Q9BQK8	851 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	BRIP1	Q9BX63	1249 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	LACRT	Q9GZZ8	138 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	CUEDC2	Q9H467	287 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	GREM2	Q9H772	168 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	ARFGAP3	Q9NP61	516 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	LATS2	Q9NRM7	1088 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	TRMT1	Q9NXH9	659 aa	Known RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	STK32B	Q9NY57	414 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	FAM53C	Q9NYF3	392 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	CALCOCO1	Q9P1Z2	691 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	FAM8A1	Q9UBU6	413 aa		4.24	□□□□□ -1.73
NSF-208	ENST00000576346	FBXO2	Q9UK22	296 aa	Predicted RBP	4.24	□□□□□ -1.73
NSF-208	ENST00000576346	PRDM4	Q9UKN5	801 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms