RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 LINC01599Q8WXQ3 324 aa18.85■□□□□ 0.61
CTDNEP1-211ENST00000575783 PRR23AA6NEV1 266 aa18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 B4E1Z4 1266 aa18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 KLRF2D3W0D1 207 aa18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 NUBP1P53384 320 aa18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 MRPS9P82933 396 aaKnown RBP18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 TSHZ1Q6ZSZ6 1077 aa18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 HOMER1Q86YM7 354 aa18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 SAMD3Q8N6K7 520 aa18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 SUSD6Q92537 303 aa18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 AGO3Q9H9G7 860 aaKnown RBP18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 CDY2AQ9Y6F7 541 aa18.84■□□□□ 0.61
CTDNEP1-211ENST00000575783 ATG2AQ2TAZ0 1938 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 GATMP50440 423 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 PPFIA1Q13136 1202 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 SEMA3FQ13275 785 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 ERMP1Q7Z2K6 904 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 NPAS4Q8IUM7 802 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 VN1R2Q8NFZ6 395 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 NEK1Q96PY6 1258 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 APOL5Q9BWW9 433 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 ZSWIM5Q9P217 1185 aa18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 ZBTB47Q9UFB7 747 aaPredicted RBP18.83■□□□□ 0.6
CTDNEP1-211ENST00000575783 FIBPO43427 364 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 STAG3L1P0CL83 205 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 MARK3P27448 753 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 SPOUT1Q5T280 376 aaKnown RBP18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 CRIPAKQ8N1N5 446 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 KREMEN2Q8NCW0 462 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 ATP8B4Q8TF62 1192 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 INPP4AQ96PE3 977 aaPredicted RBP18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 TUBE1Q9UJT0 475 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 LRFN2Q9ULH4 789 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 KMT2EQ8IZD2 1858 aa18.82■□□□□ 0.6
CTDNEP1-211ENST00000575783 RIF1Q5UIP0 2472 aaKnown RBP18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 SALL3Q9BXA9 1300 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 NBL1P41271 181 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 ID4P47928 161 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 IGBP1P78318 339 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 MRPS6P82932 125 aaKnown RBP18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 GRIK4Q16099 956 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 ZBTB10Q96DT7 871 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 MTMR8Q96EF0 704 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 FTHL17Q9BXU8 183 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 FAM49AQ9H0Q0 323 aaPredicted RBP18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 PCDHB15Q9Y5E8 787 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 PCDHB12Q9Y5F1 795 aa18.81■□□□□ 0.6
CTDNEP1-211ENST00000575783 STAM2O75886 525 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 SCG2P13521 617 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 TCF7P36402 384 aaPredicted RBP18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 TECP42680 631 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 ERVFC1P60507 584 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 DUSP6Q16828 381 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 IFIT1BQ5T764 474 aaKnown RBP18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 ANKRD45Q5TZF3 282 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 FRMD5Q7Z6J6 570 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 TMEM105Q8N8V8 129 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 PIGSQ96S52 555 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 UBAC1Q9BSL1 405 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 S1PR5Q9H228 398 aa18.8■□□□□ 0.6
CTDNEP1-211ENST00000575783 TMEM62Q0P6H9 643 aa18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 TRAF1Q13077 416 aa18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 MARCH8Q5T0T0 291 aa18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 IER5Q5VY09 327 aa18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 LLGL2Q6P1M3 1020 aa18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 GLG1Q92896 1179 aa18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 NKD2Q969F2 451 aaPredicted RBP18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 CDCA3Q99618 268 aaPredicted RBP18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 MAD2L2Q9UI95 211 aa18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 PADI3Q9ULW8 664 aa18.79■□□□□ 0.6
CTDNEP1-211ENST00000575783 FGF18O76093 207 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 SRGAP2BP0DMP2 458 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 NT5C2P49902 561 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 PDE1AP54750 535 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 MFAP1P55081 439 aaKnown RBP18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 UBE3AQ05086 875 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 PAK2Q13177 524 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 ANKRD54Q6NXT1 300 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 ADSSL1Q8N142 457 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 RILPL2Q969X0 211 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 SENP7Q9BQF6 1050 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 AAASQ9NRG9 546 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 TMEM260Q9NX78 707 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 ERAP1Q9NZ08 941 aa18.78■□□□□ 0.6
CTDNEP1-211ENST00000575783 FSD2A1L4K1 749 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 MBLAC1A4D2B0 266 aaPredicted RBP18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 M0QZ92 97 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 BRD1O95696 1058 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 MTMR3Q13615 1198 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 SYCE2Q6PIF2 218 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 UBALD2Q8IYN6 164 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 THNSL1Q8IYQ7 743 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 NR2E1Q9Y466 385 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 PCDHB7Q9Y5E2 793 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 TTC3P53804 2025 aa18.77■□□□□ 0.6
CTDNEP1-211ENST00000575783 PALM3A6NDB9 673 aaPredicted RBP18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 TBKBP1A7MCY6 615 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 APOBRQ0VD83 1088 aa18.76■□□□□ 0.59
CTDNEP1-211ENST00000575783 SLC35G1Q2M3R5 365 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms