RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MCTP2Q6DN12 878 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 GALNT17Q6IS24 598 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 PLA2G4DQ86XP0 818 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 CCDC83Q8IWF9 413 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 GIMAP8Q8ND71 665 aaPredicted RBP9.87□□□□□ -0.83
SMG6-216ENST00000575176 CAGE1Q8TC20 777 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 BICD2Q8TD16 824 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 SEPT1Q8WYJ6 367 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 HERVK_113Q902F9 699 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 HAS1Q92839 578 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 VTI1AQ96AJ9 217 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 CEP89Q96ST8 783 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 EHMT1Q9H9B1 1298 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 PRKAG2Q9UGJ0 569 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 GTF3C3Q9Y5Q9 886 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 FNDC1Q4ZHG4 1894 aaPredicted RBP9.87□□□□□ -0.83
SMG6-216ENST00000575176 TTC3P53804 2025 aa9.87□□□□□ -0.83
SMG6-216ENST00000575176 KIF28PB7ZC32 967 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 NOP56O00567 594 aaKnown RBP9.86□□□□□ -0.83
SMG6-216ENST00000575176 EIF5BO60841 1220 aaKnown RBP9.86□□□□□ -0.83
SMG6-216ENST00000575176 NLRP5P59047 1200 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 AKAP17AQ02040 695 aaKnown RBP9.86□□□□□ -0.83
SMG6-216ENST00000575176 PPIGQ13427 754 aaKnown RBP eCLIP9.86□□□□□ -0.835e-6■□□□□ 11.2
SMG6-216ENST00000575176 PLCB4Q15147 1175 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 PRR16Q569H4 304 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 ZNF618Q5T7W0 954 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 UTP14CQ5TAP6 766 aaKnown RBP9.86□□□□□ -0.83
SMG6-216ENST00000575176 KRT40Q6A162 431 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 GPR153Q6NV75 609 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 ZNF365Q70YC5 407 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 LRRC8DQ7L1W4 858 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 RPAINQ86UA6 219 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 LINC01465Q8N7H1 131 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 LBHD1Q9BQE6 289 aaPredicted RBP9.86□□□□□ -0.83
SMG6-216ENST00000575176 TTYH1Q9H313 450 aaPredicted RBP9.86□□□□□ -0.83
SMG6-216ENST00000575176 UNC45AQ9H3U1 944 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 SETD4Q9NVD3 440 aa9.86□□□□□ -0.83
SMG6-216ENST00000575176 C17orf102A2RUQ5 167 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 BTBD18B2RXH4 712 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 DDX39AO00148 427 aaKnown RBP9.85□□□□□ -0.83
SMG6-216ENST00000575176 ARHGEF15O94989 841 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 SELPP16109 830 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 MARK3P27448 753 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 NONOQ15233 471 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMG6-216ENST00000575176 FAM26DQ5JW98 314 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 PPP4R3AQ6IN85 833 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 ZNF746Q6NUN9 644 aaPredicted RBP9.85□□□□□ -0.83
SMG6-216ENST00000575176 PSRC1Q6PGN9 363 aaPredicted RBP9.85□□□□□ -0.83
SMG6-216ENST00000575176 CPLX2Q6PUV4 134 aaKnown RBP9.85□□□□□ -0.83
SMG6-216ENST00000575176 Q7L0L9 218 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 PLPPR4Q7Z2D5 763 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 KRT25Q7Z3Z0 450 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 POTEDQ86YR6 584 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 TMEM199Q8N511 208 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 C7orf31Q8N865 590 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 TRAPPC12Q8WVT3 735 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 LLPHQ9BRT6 129 aaKnown RBP9.85□□□□□ -0.83
SMG6-216ENST00000575176 ZNF577Q9BSK1 485 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 ERAP1Q9NZ08 941 aa9.85□□□□□ -0.83
SMG6-216ENST00000575176 WRAP73Q9P2S5 460 aaPredicted RBP9.85□□□□□ -0.83
SMG6-216ENST00000575176 MAFBQ9Y5Q3 323 aaPredicted RBP9.85□□□□□ -0.83
SMG6-216ENST00000575176 NRCAMQ92823 1304 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 GRXCR1A8MXD5 290 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 EML1O00423 815 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 C22orf31O95567 290 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 RFC2P35250 354 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 PBX2P40425 430 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 SMAD3P84022 425 aaKnown RBP9.84□□□□□ -0.83
SMG6-216ENST00000575176 GRIK4Q16099 956 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 PIK3AP1Q6ZUJ8 805 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 NEK8Q86SG6 692 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 DIS3L2Q8IYB7 885 aaKnown RBP9.84□□□□□ -0.83
SMG6-216ENST00000575176 LINC01599Q8WXQ3 324 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 TMX3Q96JJ7 454 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 RNPC3Q96LT9 517 aaKnown RBP9.84□□□□□ -0.83
SMG6-216ENST00000575176 GUCD1Q96NT3 240 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 RIT2Q99578 217 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 SDF4Q9BRK5 362 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 SMARCAD1Q9H4L7 1026 aa9.84□□□□□ -0.83
SMG6-216ENST00000575176 SH2B1Q9NRF2 756 aaPredicted RBP9.84□□□□□ -0.83
SMG6-216ENST00000575176 ZNF215Q9UL58 517 aaPredicted RBP9.84□□□□□ -0.83
SMG6-216ENST00000575176 YBX2Q9Y2T7 364 aaKnown RBP9.84□□□□□ -0.83
SMG6-216ENST00000575176 PLXNA4Q9HCM2 1894 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 CAND2O75155 1236 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 CHRNA1P02708 482 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 PFKMP08237 780 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 INSRRP14616 1297 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 KRT2P35908 639 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 FOSBP53539 338 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 CHMP4BP1P59074 171 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 KRT76Q01546 638 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 PPFIA1Q13136 1202 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 PPP2R5CQ13362 524 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 BFSP2Q13515 415 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 TARBP2Q15633 366 aaKnown RBP9.83□□□□□ -0.84
SMG6-216ENST00000575176 SPRED2Q7Z698 418 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 SMAP1Q8IYB5 467 aaPredicted RBP9.83□□□□□ -0.84
SMG6-216ENST00000575176 FBXO18Q8NFZ0 1043 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 ATP8B4Q8TF62 1192 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 ATP6V0A1Q93050 837 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms