RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PRR16Q569H4 304 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 GMCL1Q96IK5 515 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 PLCB1Q9NQ66 1216 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 HDAC9Q9UKV0 1011 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 DNM3Q9UQ16 869 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 PCDHGC5Q9Y5F6 944 aa9.84□□□□□ -0.83
NCBP3-204ENST00000574911 COL11A2P13942 1736 aaPredicted RBP9.84□□□□□ -0.83
NCBP3-204ENST00000574911 A0A087X0T9 212 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 BTNL10A8MVZ5 291 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 FAM86B1E9PN63 330 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 FOSP01100 380 aaPredicted RBP9.84□□□□□ -0.84
NCBP3-204ENST00000574911 IVLP07476 585 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 FAM86B2P0C5J1 330 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 FAM228BP0C875 321 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 NR2F2P24468 414 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 KLRC1P26715 233 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 MATR3P43243 847 aaKnown RBP eCLIP9.84□□□□□ -0.84
NCBP3-204ENST00000574911 SNAP25P60880 206 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 SLC7A5Q01650 507 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 ICA1Q05084 483 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 KLHL30Q0D2K2 578 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 KNOP1Q1ED39 458 aaKnown RBP9.84□□□□□ -0.84
NCBP3-204ENST00000574911 BMT2Q1RMZ1 405 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 CFAP221Q4G0U5 840 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 MEI1Q5TIA1 1274 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 TMEM179Q6ZVK1 233 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 SND1Q7KZF4 910 aaKnown RBP eCLIP9.84□□□□□ -0.84
NCBP3-204ENST00000574911 FBXO11Q86XK2 927 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 FAM133AQ8N9E0 248 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 RIN2Q8WYP3 895 aaPredicted RBP9.84□□□□□ -0.84
NCBP3-204ENST00000574911 MS4A14Q96JA4 679 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 FAM20AQ96MK3 541 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 REEP2Q9BRK0 252 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 ZHX3Q9H4I2 956 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 DBNDD1Q9H9R9 158 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 RBM12Q9NTZ6 932 aaKnown RBP9.84□□□□□ -0.84
NCBP3-204ENST00000574911 STIM2Q9P246 746 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 VAV3Q9UKW4 847 aa9.84□□□□□ -0.84
NCBP3-204ENST00000574911 MEIS1O00470 390 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 PDXKO00764 312 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 CALUO43852 315 aaPredicted RBP9.83□□□□□ -0.84
NCBP3-204ENST00000574911 PDE6BP35913 854 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 NAP1L1P55209 391 aaKnown RBP9.83□□□□□ -0.84
NCBP3-204ENST00000574911 PABPC4Q13310 644 aaKnown RBP eCLIP9.83□□□□□ -0.84
NCBP3-204ENST00000574911 SYDE2Q5VT97 1194 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 LRRC31Q6UY01 552 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 IRF2BP2Q7Z5L9 587 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 SFR1Q86XK3 245 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 NLGN1Q8N2Q7 840 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 CAVIN3Q969G5 261 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 MASTLQ96GX5 879 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 HINFPQ9BQA5 517 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 GRID2IPA4D2P6 1211 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 GOLGA6BA6NDN3 693 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 MSH4O15457 936 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 NDUFB10O96000 172 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 AFPP02771 609 aaKnown RBP9.83□□□□□ -0.84
NCBP3-204ENST00000574911 MYBP10242 640 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 ACTN1P12814 892 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 EPS15P42566 896 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 EPHB4P54760 987 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 MRPS25P82663 173 aaKnown RBP9.83□□□□□ -0.84
NCBP3-204ENST00000574911 DACT2Q5SW24 774 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 C10orf76Q5T2E6 689 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 STRIP1Q5VSL9 837 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 EMBQ6PCB8 327 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 BTNL9Q6UXG8 535 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 KIAA0825Q8IV33 1275 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 GOLGA6L1Q8N7Z2 621 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 POLR3CQ9BUI4 534 aaPredicted RBP9.83□□□□□ -0.84
NCBP3-204ENST00000574911 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.83□□□□□ -0.84
NCBP3-204ENST00000574911 PACSIN1Q9BY11 444 aa9.83□□□□□ -0.84
NCBP3-204ENST00000574911 ARMCX3Q9UH62 379 aaPredicted RBP9.83□□□□□ -0.84
NCBP3-204ENST00000574911 SPDYE3A6NKU9 549 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 OPLAHO14841 1288 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 TRIM37O94972 964 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 CYP3A4P08684 503 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 SLC9A1P19634 815 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 ABCB5Q2M3G0 1257 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 C8orf74Q6P047 294 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 SH3GL2Q99962 352 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 TRIM34Q9BYJ4 488 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 TMX4Q9H1E5 349 aaPredicted RBP9.82□□□□□ -0.84
NCBP3-204ENST00000574911 GDF3Q9NR23 364 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 ADAMTS1Q9UHI8 967 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 ZNF646O15015 1829 aaPredicted RBP9.82□□□□□ -0.84
NCBP3-204ENST00000574911 SLC16A3O15427 465 aaKnown RBP9.82□□□□□ -0.84
NCBP3-204ENST00000574911 GDF11O95390 407 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 FTCDO95954 541 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 PON1P27169 355 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 JAG1P78504 1218 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 ARID5AQ03989 594 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 NNTQ13423 1086 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 EPHA7Q15375 998 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 KIAA0753Q2KHM9 967 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 USH1GQ495M9 461 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.82□□□□□ -0.84
NCBP3-204ENST00000574911 ZNF571Q7Z3V5 609 aaPredicted RBP9.82□□□□□ -0.84
NCBP3-204ENST00000574911 KCTD17Q8N5Z5 321 aa9.82□□□□□ -0.84
NCBP3-204ENST00000574911 TYW1Q9NV66 732 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms