RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CAGE1Q8TC20 777 aa15.3■□□□□ 0.04
RPAIN-213ENST00000573577 SCLYQ96I15 445 aa15.3■□□□□ 0.04
RPAIN-213ENST00000573577 LRCH3Q96II8 777 aa15.3■□□□□ 0.04
RPAIN-213ENST00000573577 RNPC3Q96LT9 517 aaKnown RBP15.3■□□□□ 0.04
RPAIN-213ENST00000573577 RIT2Q99578 217 aa15.3■□□□□ 0.04
RPAIN-213ENST00000573577 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.3■□□□□ 0.043e-12■■□□□ 13.8
RPAIN-213ENST00000573577 IL23AQ9NPF7 189 aa15.3■□□□□ 0.04
RPAIN-213ENST00000573577 EMSYQ7Z589 1322 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 C17orf102A2RUQ5 167 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 FAM205CA6NFA0 338 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 TBX3O15119 743 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 MSH4O15457 936 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 MARCH6O60337 910 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 ACRP10323 421 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 ACTR2P61160 394 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 ZNF200P98182 395 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-213ENST00000573577 KRT76Q01546 638 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 RBL2Q08999 1139 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 PTK7Q13308 1070 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 ORC2Q13416 577 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-213ENST00000573577 HIC1Q14526 733 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 TMEM240Q5SV17 173 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 RETREG2Q8NC44 543 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 AFAP1L1Q8TED9 768 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 DHX38Q92620 1227 aaKnown RBP15.29■□□□□ 0.04
RPAIN-213ENST00000573577 GLG1Q92896 1179 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 FAM20AQ96MK3 541 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 ERAP1Q9NZ08 941 aa15.29■□□□□ 0.04
RPAIN-213ENST00000573577 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-213ENST00000573577 KIF28PB7ZC32 967 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 DHX15O43143 795 aaKnown RBP15.28■□□□□ 0.04
RPAIN-213ENST00000573577 GAS7O60861 476 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 LGR5O75473 907 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 BAG4O95429 457 aaKnown RBP15.28■□□□□ 0.04
RPAIN-213ENST00000573577 IQCF3P0C7M6 154 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 RFC2P35250 354 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 LRCH2Q5VUJ6 765 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 ZNF746Q6NUN9 644 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-213ENST00000573577 ZNF365Q70YC5 407 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 SERINC5Q86VE9 423 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 SMAP1Q8IYB5 467 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-213ENST00000573577 SLFN12Q8IYM2 578 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 SLC5A5Q92911 643 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 TEKT3Q9BXF9 490 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 RNPEPQ9H4A4 650 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 SMARCAD1Q9H4L7 1026 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 SZT2Q5T011 3432 aa15.28■□□□□ 0.04
RPAIN-213ENST00000573577 DDX39AO00148 427 aaKnown RBP15.27■□□□□ 0.04
RPAIN-213ENST00000573577 SLC37A4O43826 429 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 NEMFO60524 1076 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 SLC34A2O95436 690 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 CCNE2O96020 404 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 PFKMP08237 780 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 GNAT1P11488 350 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 ATP2B1P20020 1258 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 SYT1P21579 422 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 MARK3P27448 753 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 RILPL1Q5EBL4 403 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 GPR153Q6NV75 609 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 BRAPQ7Z569 592 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 RPUSD2Q8IZ73 545 aaKnown RBP15.27■□□□□ 0.04
RPAIN-213ENST00000573577 ETNPPLQ8TBG4 499 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 ATP6V0A1Q93050 837 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 VWCEQ96DN2 955 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 UIMC1Q96RL1 719 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 PCYT2Q99447 389 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 AZI2Q9H6S1 392 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 KCNMB3Q9NPA1 279 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 SETD4Q9NVD3 440 aa15.27■□□□□ 0.04
RPAIN-213ENST00000573577 LAMA2P24043 3122 aaKnown RBP15.27■□□□□ 0.03
RPAIN-213ENST00000573577 NRCAMQ92823 1304 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 STX6O43752 255 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 ATG7O95352 703 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 FGBP02675 491 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 CKBP12277 381 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 SELPP16109 830 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 SFNP31947 248 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 MCM7P33993 719 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 CALCRLQ16602 461 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 TRIM71Q2Q1W2 868 aaKnown RBP15.26■□□□□ 0.03
RPAIN-213ENST00000573577 TTC38Q5R3I4 469 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 RASIP1Q5U651 963 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 MIS18BP1Q6P0N0 1132 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 LRRC8DQ7L1W4 858 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 LMBR1Q8WVP7 490 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 WNT8BQ93098 351 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 SAMM50Q9Y512 469 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 TANC1Q9C0D5 1861 aa15.26■□□□□ 0.03
RPAIN-213ENST00000573577 IGKV6D-21A0A0A0MT36 114 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 WDR64B1ANS9 1081 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 TREHO43280 583 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 PSMD10O75832 226 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 PSAPP07602 524 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 JAK3P52333 1124 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 ADAM17P78536 824 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 SMAD3P84022 425 aaKnown RBP15.25■□□□□ 0.03
RPAIN-213ENST00000573577 PPFIA1Q13136 1202 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 FAM160B1Q5W0V3 765 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 ABHD15Q6UXT9 468 aa15.25■□□□□ 0.03
RPAIN-213ENST00000573577 PLPPR4Q7Z2D5 763 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms