RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 ZNF213O14771 459 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 NCK2O43639 380 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 PPP1R11O60927 126 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 CAND2O75155 1236 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 GGPS1O95749 300 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 RB1P06400 928 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 IRS1P35568 1242 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 PGM5Q15124 567 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 DIEXFQ68CQ4 756 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 IQCA1Q86XH1 822 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 ADHFE1Q8IWW8 467 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 ENAHQ8N8S7 591 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 SEPT8Q92599 483 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 ATP6V0A1Q93050 837 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 AMNQ9BXJ7 453 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 LMAN2LQ9H0V9 348 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 NSUN3Q9H649 340 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 TUT1Q9H6E5 874 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 KAT14Q9H8E8 782 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 TRIP12Q14669 1992 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 COL4A4P53420 1690 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 BRWD1Q9NSI6 2320 aa9.42□□□□□ -0.9
NPLOC4-211ENST00000573212 MBTPS2O43462 519 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 UPP2O95045 317 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 PARP1P09874 1014 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 SMIM10L2AP0DMW4 78 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 SMIM10L2BP0DMW5 78 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 MYCLP12524 364 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 SDSP20132 328 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 UBA1P22314 1058 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 ICAM3P32942 547 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 SOX11P35716 441 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 BMPR1AP36894 532 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 DLX2Q07687 328 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 SMAD2Q15796 467 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 SLC35G1Q2M3R5 365 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 RPAINQ86UA6 219 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 IL31RAQ8NI17 732 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 UIMC1Q96RL1 719 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 YME1L1Q96TA2 773 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 USP26Q9BXU7 913 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 UPF3BQ9BZI7 483 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 RIOX1Q9H6W3 641 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 EHMT1Q9H9B1 1298 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 MLXIPQ9HAP2 919 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 FAM50BQ9Y247 325 aa9.41□□□□□ -0.9
NPLOC4-211ENST00000573212 SPATA31C2B4DYI2 1134 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 B4E1Z4 1266 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 ENPP3O14638 875 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 ZBTB5O15062 677 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 SORBS3O60504 671 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 LGALS2P05162 132 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 MRPS9P82933 396 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 HYAL1Q12794 435 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 CAMK1Q14012 370 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 SEC23AQ15436 765 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 HERC4Q5GLZ8 1057 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 SWT1Q5T5J6 900 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 HFE2Q6ZVN8 426 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 BMP8AQ7Z5Y6 402 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 EPS8L1Q8TE68 723 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 APBB2Q92870 758 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 CLP1Q92989 425 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 ZNF689Q96CS4 500 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 IL17RAQ96F46 866 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 RC3H2Q9HBD1 1191 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 SETD4Q9NVD3 440 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 CLDND1Q9NY35 253 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 MAD2L2Q9UI95 211 aa9.4□□□□□ -0.9
NPLOC4-211ENST00000573212 COL4A6Q14031 1691 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 KLRF2D3W0D1 207 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 SNPHO15079 494 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 GRM6O15303 877 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 ATG7O95352 703 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 CHRNA1P02708 482 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 GNAT1P11488 350 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 CCND2P30279 289 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 HOXA13P31271 388 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 ADAM15Q13444 863 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 HDAC1Q13547 482 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 CRIPAKQ8N1N5 446 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 FIBCD1Q8N539 461 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 PRR7Q8TB68 274 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 MFSD14AQ96MC6 490 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 INPP4AQ96PE3 977 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 GPR20Q99678 358 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 DSCC1Q9BVC3 393 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 IFIH1Q9BYX4 1025 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 OSBPL3Q9H4L5 887 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 TELO2Q9Y4R8 837 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 PCDHA1Q9Y5I3 950 aa9.39□□□□□ -0.91
NPLOC4-211ENST00000573212 FRMPD4Q14CM0 1322 aa9.38□□□□□ -0.91
NPLOC4-211ENST00000573212 GCOM1H8Y6P7 765 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-211ENST00000573212 CYTH3O43739 400 aa9.38□□□□□ -0.91
NPLOC4-211ENST00000573212 DHX16O60231 1041 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-211ENST00000573212 STAM2O75886 525 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms