RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 KRT32Q14532 448 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 LY6KQ17RY6 165 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 MFSD5Q6N075 450 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 DHX32Q7L7V1 743 aaKnown RBP8.58□□□□□ -1.04
NUP88-205ENST00000572809 VSIG10LQ86VR7 867 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 SGMS1Q86VZ5 419 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 FAM126BQ8IXS8 530 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 CMTR1Q8N1G2 835 aaKnown RBP8.58□□□□□ -1.04
NUP88-205ENST00000572809 SRBD1Q8N5C6 995 aaKnown RBP8.58□□□□□ -1.04
NUP88-205ENST00000572809 FANCBQ8NB91 859 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 PDCD2LQ9BRP1 358 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 MTG1Q9BT17 334 aaPredicted RBP8.58□□□□□ -1.04
NUP88-205ENST00000572809 SPZ1Q9BXG8 430 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 SEC63Q9UGP8 760 aaKnown RBP8.58□□□□□ -1.04
NUP88-205ENST00000572809 DDX41Q9UJV9 622 aaKnown RBP8.58□□□□□ -1.04
NUP88-205ENST00000572809 TBX21Q9UL17 535 aa8.58□□□□□ -1.04
NUP88-205ENST00000572809 MYH6P13533 1939 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.57□□□□□ -1.04
NUP88-205ENST00000572809 PLEKHA8P1O95397 391 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 PGM5Q15124 567 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 ADCK5Q3MIX3 580 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 C9orf50Q5SZB4 431 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 KCNV1Q6PIU1 500 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 RAB11FIP4Q86YS3 637 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 TMEM199Q8N511 208 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 TRPV6Q9H1D0 765 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 MRVI1Q9Y6F6 885 aa8.57□□□□□ -1.04
NUP88-205ENST00000572809 BAZ2BQ9UIF8 2168 aaKnown RBP8.56□□□□□ -1.04
NUP88-205ENST00000572809 ATP9BO43861 1147 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 B4GALT4O60513 344 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 HMGB1P09429 215 aaKnown RBP8.56□□□□□ -1.04
NUP88-205ENST00000572809 SUPT20HL2P0C7V6 817 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 TGFB3P10600 412 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 CSF2RAP15509 400 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 CASTP20810 708 aaKnown RBP8.56□□□□□ -1.04
NUP88-205ENST00000572809 CCND2P30279 289 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 EPHB4P54760 987 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 WDR4P57081 412 aaKnown RBP8.56□□□□□ -1.04
NUP88-205ENST00000572809 ARHGAP1Q07960 439 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 LAMC2Q13753 1193 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 NBPF20Q3BBV1 942 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 USP17L6PQ6QN14 398 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 DHX37Q8IY37 1157 aaKnown RBP8.56□□□□□ -1.04
NUP88-205ENST00000572809 SMARCC2Q8TAQ2 1214 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 AFG1LQ8WV93 481 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 BAP1Q92560 729 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 KCNB2Q92953 911 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 CUL5Q93034 780 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 TCEANC2Q96MN5 208 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 ALDH8A1Q9H2A2 487 aaPredicted RBP8.56□□□□□ -1.04
NUP88-205ENST00000572809 RBM28Q9NW13 759 aaKnown RBP8.56□□□□□ -1.04
NUP88-205ENST00000572809 PPP4R2Q9NY27 417 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 BRPF3Q9ULD4 1205 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 LRRC37A2A6NM11 1700 aa8.56□□□□□ -1.04
NUP88-205ENST00000572809 hCG_1642624A0A1W2PR95 340 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 MEIS2O14770 477 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 ZBTB43O43298 467 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 PPFIA4O75335 1185 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 STAM2O75886 525 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 REC8O95072 547 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 MMP3P08254 477 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 TIMP2P16035 220 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 CYP2C18P33260 490 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 HSPA4P34932 840 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 CHMP4BP1P59074 171 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 FGD1P98174 961 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 PTPN11Q06124 597 aaPredicted RBP8.55□□□□□ -1.04
NUP88-205ENST00000572809 PPIGQ13427 754 aaKnown RBP eCLIP8.55□□□□□ -1.04
NUP88-205ENST00000572809 DGKDQ16760 1214 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 FAM47CQ5HY64 1035 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 ERICH6BQ5W0A0 696 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 NFRKBQ6P4R8 1299 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 APOA5Q6Q788 366 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 TMTC3Q6ZXV5 915 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 C16orf59Q7L2K0 433 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 MICU3Q86XE3 530 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 TMEM151AQ8N4L1 468 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 DEFB123Q8N688 67 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 RNPC3Q96LT9 517 aaKnown RBP8.55□□□□□ -1.04
NUP88-205ENST00000572809 UCN2Q96RP3 112 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.55□□□□□ -1.04
NUP88-205ENST00000572809 HIPK3Q9H422 1215 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 VRTNQ9H8Y1 702 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 PSTPIP2Q9H939 334 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 RTEL1Q9NZ71 1219 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 SNX14Q9Y5W7 946 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 RANBP2P49792 3224 aaKnown RBP8.55□□□□□ -1.04
NUP88-205ENST00000572809 DNAH12Q6ZR08 3092 aa8.55□□□□□ -1.04
NUP88-205ENST00000572809 LTBP2Q14767 1821 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 KLF18A0A0U1RQI7 1052 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.54□□□□□ -1.04
NUP88-205ENST00000572809 PIK3CDO00329 1044 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 GGPS1O95749 300 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 FGBP02675 491 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 ACRP10323 421 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 PSMA5P28066 241 aa8.54□□□□□ -1.04
NUP88-205ENST00000572809 CCL23P55773 120 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms