RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 HERVK_113Q902F9 699 aa14.38□□□□□ -0.11
TVP23B-204ENST00000571018 ATP6V0A1Q93050 837 aa14.38□□□□□ -0.11
TVP23B-204ENST00000571018 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
TVP23B-204ENST00000571018 ZSCAN31Q96LW9 406 aaPredicted RBP14.38□□□□□ -0.11
TVP23B-204ENST00000571018 AZI2Q9H6S1 392 aa14.38□□□□□ -0.11
TVP23B-204ENST00000571018 SETD4Q9NVD3 440 aa14.38□□□□□ -0.11
TVP23B-204ENST00000571018 NRCAMQ92823 1304 aa14.38□□□□□ -0.11
TVP23B-204ENST00000571018 CYP3A7-CYP3A51PA0A087WV96 503 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.37□□□□□ -0.11
TVP23B-204ENST00000571018 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.37□□□□□ -0.11
TVP23B-204ENST00000571018 DDX39AO00148 427 aaKnown RBP14.37□□□□□ -0.11
TVP23B-204ENST00000571018 TREHO43280 583 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 JAK2O60674 1132 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 PARNO95453 639 aaKnown RBP14.37□□□□□ -0.11
TVP23B-204ENST00000571018 CYP3A7P24462 503 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 STAT5BP51692 787 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 SMAD3P84022 425 aaKnown RBP14.37□□□□□ -0.11
TVP23B-204ENST00000571018 RABEP1Q15276 862 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 MOXD1Q6UVY6 613 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 ABHD15Q6UXT9 468 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 LRRC8DQ7L1W4 858 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 PLPPR4Q7Z2D5 763 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 IL27Q8NEV9 243 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 LMBR1Q8WVP7 490 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 WNT8BQ93098 351 aa14.37□□□□□ -0.11
TVP23B-204ENST00000571018 RANBP2P49792 3224 aaKnown RBP14.36□□□□□ -0.11
TVP23B-204ENST00000571018 CCDC194A0A1B0GVG4 234 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 MSH4O15457 936 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 MARK3P27448 753 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 SLC26A2P50443 739 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 GPNMBQ14956 572 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 Q4G0T1 1027 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 ZNF618Q5T7W0 954 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 ZNF746Q6NUN9 644 aaPredicted RBP14.36□□□□□ -0.11
TVP23B-204ENST00000571018 TRAF7Q6Q0C0 670 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 OTOP2Q7RTS6 562 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 DEFB128Q7Z7B8 93 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 OXER1Q8TDS5 423 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 TNPO1Q92973 898 aaKnown RBP14.36□□□□□ -0.11
TVP23B-204ENST00000571018 MBOAT7Q96N66 472 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 UIMC1Q96RL1 719 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 RIT2Q99578 217 aa14.36□□□□□ -0.11
TVP23B-204ENST00000571018 LLPHQ9BRT6 129 aaKnown RBP14.36□□□□□ -0.11
TVP23B-204ENST00000571018 MTIF3Q9H2K0 278 aaKnown RBP14.36□□□□□ -0.11
TVP23B-204ENST00000571018 SH2B1Q9NRF2 756 aaPredicted RBP14.36□□□□□ -0.11
TVP23B-204ENST00000571018 CAND2O75155 1236 aa14.35□□□□□ -0.11
TVP23B-204ENST00000571018 TDP2O95551 362 aa14.35□□□□□ -0.11
TVP23B-204ENST00000571018 KRT76Q01546 638 aa14.35□□□□□ -0.11
TVP23B-204ENST00000571018 PPFIA1Q13136 1202 aa14.35□□□□□ -0.11
TVP23B-204ENST00000571018 INF2Q27J81 1249 aa14.35□□□□□ -0.11
TVP23B-204ENST00000571018 FAM109BQ6ICB4 259 aaPredicted RBP14.35□□□□□ -0.11
TVP23B-204ENST00000571018 MIS18BP1Q6P0N0 1132 aa14.35□□□□□ -0.11
TVP23B-204ENST00000571018 CCDC83Q8IWF9 413 aa14.35□□□□□ -0.11
TVP23B-204ENST00000571018 SMAP1Q8IYB5 467 aaPredicted RBP14.35□□□□□ -0.11
TVP23B-204ENST00000571018 SLC5A5Q92911 643 aa14.35□□□□□ -0.11
TVP23B-204ENST00000571018 CXXC1Q9P0U4 656 aaPredicted RBP14.35□□□□□ -0.11
TVP23B-204ENST00000571018 TANC1Q9C0D5 1861 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 MBLAC1A4D2B0 266 aaPredicted RBP14.34□□□□□ -0.11
TVP23B-204ENST00000571018 RRN3P2A6NIE6 340 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 CXCL10P02778 98 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 MMP1P03956 469 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 ACTN1P12814 892 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 INSRRP14616 1297 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 KRT2P35908 639 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 THPOP40225 353 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 PLCB4Q15147 1175 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 GRIK4Q16099 956 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 MARCH8Q5T0T0 291 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 FAM160B1Q5W0V3 765 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 SWSAP1Q6NVH7 229 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 PIK3AP1Q6ZUJ8 805 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 NEK8Q86SG6 692 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 CCDC60Q8IWA6 550 aaPredicted RBP14.34□□□□□ -0.11
TVP23B-204ENST00000571018 TNFRSF25Q93038 417 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 TBC1D32Q96NH3 1257 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 FTOQ9C0B1 505 aaKnown RBP eCLIP14.34□□□□□ -0.11
TVP23B-204ENST00000571018 BRMS1Q9HCU9 246 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 ZNF302Q9NR11 478 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 TCEAL9Q9UHQ7 104 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 PCDHA10Q9Y5I2 948 aa14.34□□□□□ -0.11
TVP23B-204ENST00000571018 POTEB3A0JP26 581 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 RSPH10B2B2RC85 870 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 BACH1O14867 736 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 ST18O60284 1047 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 NBNO60934 754 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 PSMD10O75832 226 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 GABBR2O75899 941 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 PSAPP07602 524 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 RSPH10BP0C881 870 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
TVP23B-204ENST00000571018 NR5A1Q13285 461 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 TRIM29Q14134 588 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 MBTPS1Q14703 1052 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 LETM2Q2VYF4 491 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 EARS2Q5JPH6 523 aaKnown RBP14.33□□□□□ -0.12
TVP23B-204ENST00000571018 LRCH2Q5VUJ6 765 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 KRT40Q6A162 431 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 PPP4R3AQ6IN85 833 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 TAF2Q6P1X5 1199 aa14.33□□□□□ -0.12
TVP23B-204ENST00000571018 POTEBQ6S5H4 581 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms