RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ATP6V0A2Q9Y487 856 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 RBM8AQ9Y5S9 174 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 PTCH2Q9Y6C5 1203 aa3.97□□□□□ -1.77
SMG6-208ENST00000570874 DICER1Q9UPY3 1922 aaKnown RBP3.97□□□□□ -1.77
SMG6-208ENST00000570874 MAST3O60307 1309 aa3.96□□□□□ -1.77
SMG6-208ENST00000570874 A0A087X0B3 334 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 CCDC196A0A1B0GTZ2 297 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 SLC27A2O14975 620 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 FOXP2O15409 715 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 NEMFO60524 1076 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 ZPR1O75312 459 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 B3GALNT1O75752 331 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 GFPT2O94808 682 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 LETM1O95202 739 aaPredicted RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 PDE8BO95263 885 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 IGHA2P01877 340 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 PGRP06401 933 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 ATP6V1B1P15313 513 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 ZSCAN20P17040 1043 aaPredicted RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 GARTP22102 1010 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 MPSTP25325 297 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 TM4SF1P30408 202 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 RFC4P35249 363 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 GYG1P46976 350 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 PDE6CP51160 858 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 NEK4P51957 841 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 INHBEP58166 350 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 NLRP12P59046 1061 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 EN1Q05925 392 aaPredicted RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 ST3GAL1Q11201 340 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 MTMR1Q13613 665 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 PKP1Q13835 747 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 PPP2R5DQ14738 602 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 TNIP1Q15025 636 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 NECTIN1Q15223 517 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 PDCD2Q16342 344 aaPredicted RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 SKOR2Q2VWA4 1001 aaPredicted RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 MINDY4Q4G0A6 757 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMG6-208ENST00000570874 CCDC152Q4G0S7 254 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 RRP12Q5JTH9 1297 aaKnown RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 PERM1Q5SV97 790 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 ZMYM1Q5SVZ6 1142 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 TRAPPC3LQ5T215 181 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 CFAP58Q5T655 872 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 CREB3L3Q68CJ9 461 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 CCDC102BQ68D86 513 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 IGF2-ASQ6U949 168 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 TMCO3Q6UWJ1 677 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 STOX1Q6ZVD7 989 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 COL23A1Q86Y22 540 aaPredicted RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 SLC44A2Q8IWA5 706 aaPredicted RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 FAM186BQ8IYM0 893 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 RNF168Q8IYW5 571 aaPredicted RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 C7orf31Q8N865 590 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 JMYQ8N9B5 988 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 ZNF454Q8N9F8 522 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 KBTBD3Q8NAB2 608 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 BICD2Q8TD16 824 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 NEK9Q8TD19 979 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 MGARPQ8TDB4 240 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 CPLX3Q8WVH0 158 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 POF1BQ8WVV4 589 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 CCT6BQ92526 530 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 COL26A1Q96A83 441 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 FAM81BQ96LP2 452 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 GBP4Q96PP9 640 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 TACO1Q9BSH4 297 aaKnown RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 SPON2Q9BUD6 331 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 LSM14BQ9BX40 385 aaKnown RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 ZCCHC17Q9NP64 241 aaKnown RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 LUC7LQ9NQ29 371 aaKnown RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 TRPV5Q9NQA5 729 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 DONSONQ9NYP3 566 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 SEPT10Q9P0V9 454 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 PDP2Q9P2J9 529 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMG6-208ENST00000570874 ADAMTS1Q9UHI8 967 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 FBXL5Q9UKA1 691 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 DENND2AQ9ULE3 1009 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 AGTPBP1Q9UPW5 1226 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 MAPRE3Q9UPY8 281 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 FAM50BQ9Y247 325 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 EFR3BQ9Y2G0 817 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 SPEF1Q9Y4P9 236 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 PCDHGB3Q9Y5G1 929 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 SLC4A7Q9Y6M7 1214 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 RFX7Q2KHR2 1363 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 RTL9Q8NET4 1388 aa3.96□□□□□ -1.78
SMG6-208ENST00000570874 RPAP1Q9BWH6 1393 aaPredicted RBP3.96□□□□□ -1.78
SMG6-208ENST00000570874 WDR81Q562E7 1941 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 A0A0B4J203 849 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 DDX11L8A8MPP1 907 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 RTCAO00442 366 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 CASQ2O14958 399 aaPredicted RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 ST8SIA5O15466 376 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 RNF113AO15541 343 aaKnown RBP3.95□□□□□ -1.78
SMG6-208ENST00000570874 RASA4O43374 803 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 PPFIA2O75334 1257 aa3.95□□□□□ -1.78
SMG6-208ENST00000570874 TIPRLO75663 272 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms