RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 GPNMBQ14956 572 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 Q4G0T1 1027 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 ZNF746Q6NUN9 644 aaPredicted RBP12.63□□□□□ -0.39
SMG6-206ENST00000570668 TRAF7Q6Q0C0 670 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 OTOP2Q7RTS6 562 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 DEFB128Q7Z7B8 93 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 SMAP1Q8IYB5 467 aaPredicted RBP12.63□□□□□ -0.39
SMG6-206ENST00000570668 OXER1Q8TDS5 423 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 TNPO1Q92973 898 aaKnown RBP12.63□□□□□ -0.39
SMG6-206ENST00000570668 RIT2Q99578 217 aa12.63□□□□□ -0.39
SMG6-206ENST00000570668 LLPHQ9BRT6 129 aaKnown RBP12.63□□□□□ -0.39
SMG6-206ENST00000570668 MTIF3Q9H2K0 278 aaKnown RBP12.63□□□□□ -0.39
SMG6-206ENST00000570668 CXXC1Q9P0U4 656 aaPredicted RBP12.63□□□□□ -0.39
SMG6-206ENST00000570668 CCDC194A0A1B0GVG4 234 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 CAND2O75155 1236 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 TDP2O95551 362 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 KRT76Q01546 638 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 PLCB4Q15147 1175 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 GRIK4Q16099 956 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 INF2Q27J81 1249 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 ZNF618Q5T7W0 954 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 FAM109BQ6ICB4 259 aaPredicted RBP12.62□□□□□ -0.39
SMG6-206ENST00000570668 MIS18BP1Q6P0N0 1132 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 CCDC83Q8IWF9 413 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 SLC5A5Q92911 643 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 TBC1D32Q96NH3 1257 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 UIMC1Q96RL1 719 aa12.62□□□□□ -0.39
SMG6-206ENST00000570668 CDH23Q9H251 3354 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 MBLAC1A4D2B0 266 aaPredicted RBP12.61□□□□□ -0.39
SMG6-206ENST00000570668 RRN3P2A6NIE6 340 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 BACH1O14867 736 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 ST18O60284 1047 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 NBNO60934 754 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 CXCL10P02778 98 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 MMP1P03956 469 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 ACTN1P12814 892 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 INSRRP14616 1297 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 KRT2P35908 639 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 THPOP40225 353 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 MARCH8Q5T0T0 291 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 FAM160B1Q5W0V3 765 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 PPP4R3AQ6IN85 833 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 TAF2Q6P1X5 1199 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 PIK3AP1Q6ZUJ8 805 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 NEK8Q86SG6 692 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 RPAINQ86UA6 219 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 CCDC60Q8IWA6 550 aaPredicted RBP12.61□□□□□ -0.39
SMG6-206ENST00000570668 TNFRSF25Q93038 417 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 FTOQ9C0B1 505 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMG6-206ENST00000570668 BRMS1Q9HCU9 246 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 TCEAL9Q9UHQ7 104 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 PCDHA10Q9Y5I2 948 aa12.61□□□□□ -0.39
SMG6-206ENST00000570668 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 WDR64B1ANS9 1081 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 RSPH10B2B2RC85 870 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 GAS7O60861 476 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 PSMD10O75832 226 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 RSPH10BP0C881 870 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 GCFC2P16383 781 aaKnown RBP12.6□□□□□ -0.39
SMG6-206ENST00000570668 HMGN5P82970 282 aaKnown RBP12.6□□□□□ -0.39
SMG6-206ENST00000570668 NR5A1Q13285 461 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 TRIM29Q14134 588 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 MBTPS1Q14703 1052 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 LETM2Q2VYF4 491 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 EARS2Q5JPH6 523 aaKnown RBP12.6□□□□□ -0.39
SMG6-206ENST00000570668 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 KRT40Q6A162 431 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 SWSAP1Q6NVH7 229 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 PDXDC2PQ6P474 469 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 B3GNT9Q6UX72 402 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 DEFB123Q8N688 67 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 ETNPPLQ8TBG4 499 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 ATP8B4Q8TF62 1192 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 TEKT3Q9BXF9 490 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 ZNF302Q9NR11 478 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 DDX25Q9UHL0 483 aaKnown RBP12.6□□□□□ -0.39
SMG6-206ENST00000570668 TUBE1Q9UJT0 475 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 TRPC6Q9Y210 931 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 MAFBQ9Y5Q3 323 aaPredicted RBP12.6□□□□□ -0.39
SMG6-206ENST00000570668 SLC4A7Q9Y6M7 1214 aa12.6□□□□□ -0.39
SMG6-206ENST00000570668 MYH9P35579 1960 aaKnown RBP12.6□□□□□ -0.39
SMG6-206ENST00000570668 TMEM265A0A087WTH1 108 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 BTBD18B2RXH4 712 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 SLC37A4O43826 429 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 HBP1O60381 514 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 BAIAP3O94812 1187 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 RPLP2P05387 115 aaKnown RBP12.59□□□□□ -0.39
SMG6-206ENST00000570668 PSAPP07602 524 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 ATP4AP20648 1035 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 SFNP31947 248 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 FAM26DQ5JW98 314 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 CNKSR3Q6P9H4 555 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 RUFY4Q6ZNE9 571 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 Q7L0L9 218 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 DIS3L2Q8IYB7 885 aaKnown RBP12.59□□□□□ -0.39
SMG6-206ENST00000570668 RDM1Q8NG50 284 aa12.59□□□□□ -0.39
SMG6-206ENST00000570668 NAP1L4Q99733 375 aaKnown RBP12.59□□□□□ -0.39
SMG6-206ENST00000570668 KCNMB3Q9NPA1 279 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms