RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 RMDN1Q96DB5 314 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 DCTPP1Q9H773 170 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 SORCS3Q9UPU3 1222 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 EPG5Q9HCE0 2579 aa12.14□□□□□ -0.47
CTDNEP1-202ENST00000570380 NRCAMQ92823 1304 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 DHX16O60231 1041 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 CCND2P30279 289 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 TECP42680 631 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 TAF2Q6P1X5 1199 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 METTL7BQ6UX53 244 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 MIER1Q8N108 512 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 OTUD7AQ8TE49 926 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 DNAJB3Q8WWF6 145 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 CDCA3Q99618 268 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 CHMP4BQ9H444 224 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 MAP3K20Q9NYL2 800 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 CDH22Q9UJ99 828 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 CDY2AQ9Y6F7 541 aa12.13□□□□□ -0.47
CTDNEP1-202ENST00000570380 NCOR2Q9Y618 2525 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 FRYLO94915 3013 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 LAMA4Q16363 1823 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 FSD2A1L4K1 749 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 FSCN2O14926 492 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 PPP1R11O60927 126 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 ARP10275 920 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 CD52P31358 61 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 CLCN5P51795 746 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 MRPS9P82933 396 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 UBE3AQ05086 875 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 NEDD9Q14511 834 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 ASPRV1Q53RT3 343 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 DGLUCYQ7Z3D6 616 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 TBC1D10CQ8IV04 446 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 AMNQ9BXJ7 453 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 NR2E1Q9Y466 385 aa12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 TPRP12270 2363 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-202ENST00000570380 FANCMQ8IYD8 2048 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 SPATA31C2B4DYI2 1134 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 C2CD4DB7Z1M9 353 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 FGF18O76093 207 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 STAG3L1P0CL83 205 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 MARCH8Q5T0T0 291 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 RSPH3Q86UC2 560 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 RASGRP4Q8TDF6 673 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 FTHL17Q9BXU8 183 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 POMKQ9H5K3 350 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 PCDHB12Q9Y5F1 795 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 NEDD4P46934 1319 aa12.11□□□□□ -0.47
CTDNEP1-202ENST00000570380 DENND4AQ7Z401 1863 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 CEP250Q9BV73 2442 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 MBLAC1A4D2B0 266 aaPredicted RBP12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 PI15O43692 258 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 ASGR2P07307 311 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 PARP1P09874 1014 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 SRGAP2BP0DMP2 458 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 PCP11498 1178 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 SCG2P13521 617 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 MRPS6P82932 125 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 SP4Q02446 784 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 PPFIA1Q13136 1202 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 CWF19L1Q69YN2 538 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 PDE12Q6L8Q7 609 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 LLGL2Q6P1M3 1020 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 FCHSD1Q86WN1 690 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 STAG2Q8N3U4 1231 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 SAMD3Q8N6K7 520 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 MTMR8Q96EF0 704 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 FAM227BQ96M60 508 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 CNTNAP3BQ96NU0 1288 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 CNTNAP3Q9BZ76 1288 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 MFSD1Q9H3U5 465 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 TMEM260Q9NX78 707 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 TUBE1Q9UJT0 475 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 PADI3Q9ULW8 664 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 SQORQ9Y6N5 450 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 EVPLQ92817 2033 aa12.1□□□□□ -0.47
CTDNEP1-202ENST00000570380 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 A0A0D9SFI3 127 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 GCOM1H8Y6P7 765 aaPredicted RBP12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 POLR2MP0CAP2 368 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 HOXB8P17481 243 aaPredicted RBP12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 GRIK4Q16099 956 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 SPOUT1Q5T280 376 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 PLPP4Q5VZY2 271 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 KIAA2013Q8IYS2 634 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 ESR2Q92731 530 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 ZBTB10Q96DT7 871 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms