RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 THPOP40225 353 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 RBM25P49756 843 aaKnown RBP14.79□□□□□ -0.04
CNOT1-220ENST00000569916 PPFIA1Q13136 1202 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 ABHD15Q6UXT9 468 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 PLPPR4Q7Z2D5 763 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 PBX4Q9BYU1 374 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 FTOQ9C0B1 505 aaKnown RBP eCLIP14.79□□□□□ -0.04
CNOT1-220ENST00000569916 TTYH1Q9H313 450 aaPredicted RBP14.79□□□□□ -0.04
CNOT1-220ENST00000569916 AZI2Q9H6S1 392 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 TBC1D22BQ9NU19 505 aa14.79□□□□□ -0.04
CNOT1-220ENST00000569916 TMEM265A0A087WTH1 108 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 MSH4O15457 936 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 JAK2O60674 1132 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 CAND2O75155 1236 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 TDP2O95551 362 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 XBP1P17861 261 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 PBX2P40425 430 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 STAT5BP51692 787 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 PLCB4Q15147 1175 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 NONOQ15233 471 aaKnown RBP eCLIP14.78□□□□□ -0.04
CNOT1-220ENST00000569916 GRIK4Q16099 956 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 TCTN1Q2MV58 587 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 ZNF746Q6NUN9 644 aaPredicted RBP14.78□□□□□ -0.04
CNOT1-220ENST00000569916 KRT25Q7Z3Z0 450 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 CCDC60Q8IWA6 550 aaPredicted RBP14.78□□□□□ -0.04
CNOT1-220ENST00000569916 WASF1Q92558 559 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 FAM161BQ96MY7 647 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 SLC4A7Q9Y6M7 1214 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 LOXHD1Q8IVV2 1947 aa14.78□□□□□ -0.04
CNOT1-220ENST00000569916 CYP3A7-CYP3A51PA0A087WV96 503 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 MBLAC1A4D2B0 266 aaPredicted RBP14.77□□□□□ -0.05
CNOT1-220ENST00000569916 RSPH10B2B2RC85 870 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 BAIAP3O94812 1187 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 RSPH10BP0C881 870 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 INSRRP14616 1297 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 CYP3A7P24462 503 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 KRT76Q01546 638 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 INF2Q27J81 1249 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 Q4G0T1 1027 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 MARCH8Q5T0T0 291 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 CNKSR3Q6P9H4 555 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 MOXD1Q6UVY6 613 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 RUFY4Q6ZNE9 571 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 OXER1Q8TDS5 423 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 SLC5A5Q92911 643 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 MBOAT7Q96N66 472 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 GUCD1Q96NT3 240 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 TUBE1Q9UJT0 475 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 LIMCH1Q9UPQ0 1083 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 TRPC6Q9Y210 931 aa14.77□□□□□ -0.05
CNOT1-220ENST00000569916 BACH1O14867 736 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 CTSHP09668 335 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 ATP2A2P16615 1042 aaKnown RBP14.76□□□□□ -0.05
CNOT1-220ENST00000569916 SLC26A2P50443 739 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 IGBP1P78318 339 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 FAM160B1Q5W0V3 765 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 MIS18BP1Q6P0N0 1132 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 TAF2Q6P1X5 1199 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 SMAP1Q8IYB5 467 aaPredicted RBP14.76□□□□□ -0.05
CNOT1-220ENST00000569916 TIFAQ96CG3 184 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 ZBTB10Q96DT7 871 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 SLC9A7Q96T83 725 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 OSBPL7Q9BZF2 842 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 SEMA6BQ9H3T3 888 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 ZNF302Q9NR11 478 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 RNF216Q9NWF9 866 aaPredicted RBP14.76□□□□□ -0.05
CNOT1-220ENST00000569916 TCEAL9Q9UHQ7 104 aa14.76□□□□□ -0.05
CNOT1-220ENST00000569916 IGSF9BQ9UPX0 1349 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 CCDC194A0A1B0GVG4 234 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 POTEB3A0JP26 581 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 RRN3P2A6NIE6 340 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 RABGGTBP53611 331 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 RAB30Q15771 203 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 EARS2Q5JPH6 523 aaKnown RBP14.75□□□□□ -0.05
CNOT1-220ENST00000569916 FAM26DQ5JW98 314 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 SWSAP1Q6NVH7 229 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 PDXDC2PQ6P474 469 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 POTEBQ6S5H4 581 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 NEK8Q86SG6 692 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 RPAINQ86UA6 219 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 CCDC83Q8IWF9 413 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 ATP8B4Q8TF62 1192 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 TRAPPC12Q8WVT3 735 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 TNFRSF25Q93038 417 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 GJA10Q969M2 543 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 RIT2Q99578 217 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 YBX2Q9Y2T7 364 aaKnown RBP14.75□□□□□ -0.05
CNOT1-220ENST00000569916 PCDHA10Q9Y5I2 948 aa14.75□□□□□ -0.05
CNOT1-220ENST00000569916 FAM205CA6NFA0 338 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 WDR64B1ANS9 1081 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 SLC37A4O43826 429 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 GAS7O60861 476 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 PSMD10O75832 226 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 PSAPP07602 524 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 ATP4AP20648 1035 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 KRT2P35908 639 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 FOSBP53539 338 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 WDR5P61964 334 aaKnown RBP14.74□□□□□ -0.05
CNOT1-220ENST00000569916 MGAT3Q09327 533 aa14.74□□□□□ -0.05
CNOT1-220ENST00000569916 NR5A1Q13285 461 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms