RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	FGF18	O76093	207 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	WEE2	P0C1S8	567 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	GLUL	P15104	373 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	MCC	P23508	829 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	SLC1A4	P43007	532 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	MRPL12	P52815	198 aa	Known RBP	7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	RPS6	P62753	249 aa	Known RBP	7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	RING1	Q06587	406 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	IK	Q13123	557 aa	Predicted RBP	7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	SLFNL1	Q499Z3	407 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	SBK1	Q52WX2	424 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	RCSD1	Q6JBY9	416 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	RNF207	Q6ZRF8	634 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	SEPT14	Q6ZU15	432 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	RASGRP2	Q7LDG7	609 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	ZBTB44	Q8NCP5	570 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	LINC01599	Q8WXQ3	324 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	NELL1	Q92832	810 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	RNPEP	Q9H4A4	650 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	TBC1D17	Q9HA65	648 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	AAAS	Q9NRG9	546 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	SMC4	Q9NTJ3	1288 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	DAXX	Q9UER7	740 aa	Predicted RBP	7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	FBXO4	Q9UKT5	387 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	NOB1	Q9ULX3	412 aa	Known RBP	7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	SMG5	Q9UPR3	1016 aa	Known RBP	7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	LZTS1	Q9Y250	596 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	SIT1	Q9Y3P8	196 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	MCM3AP	O60318	1980 aa		7.36	□□□□□ -1.23
BBS4-218	ENST00000569440	FLNB	O75369	2602 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	ZFYVE26	Q68DK2	2539 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	CYSRT1	A8MQ03	144 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	C1QTNF9B	B2RNN3	333 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	ZZEF1	O43149	2961 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	NARS	O43776	548 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	TBC1D4	O60343	1298 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	GNAI2	P04899	355 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	C1QTNF9	P0C862	333 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	SMIM10L2A	P0DMW4	78 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	SMIM10L2B	P0DMW5	78 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	GHR	P10912	638 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	ADAM17	P78536	824 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	LPIN1	Q14693	890 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	PAN2	Q504Q3	1202 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	SPECC1	Q5M775	1068 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	ATAT1	Q5SQI0	421 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	KIAA1841	Q6NSI8	718 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	KCTD1	Q719H9	257 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	NPAS4	Q8IUM7	802 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	ZNF454	Q8N9F8	522 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	RGS22	Q8NE09	1264 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	DDX1	Q92499	740 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	DDRGK1	Q96HY6	314 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	API5	Q9BZZ5	524 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	NGRN	Q9NPE2	291 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	ASH1L	Q9NR48	2969 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	TMEM260	Q9NX78	707 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	IGSF9	Q9P2J2	1179 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	ARPP21	Q9UBL0	812 aa	Predicted RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	DBR1	Q9UK59	544 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	NOP58	Q9Y2X3	529 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	PCDHB12	Q9Y5F1	795 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	HCFC2	Q9Y5Z7	792 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	SLC4A4	Q9Y6R1	1079 aa		7.35	□□□□□ -1.23
BBS4-218	ENST00000569440	MICAL3	Q7RTP6	2002 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	SRRM3	A6NNA2	597 aa	Predicted RBP	7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	TM4SF5	O14894	197 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	SURF6	O75683	361 aa	Known RBP	7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	CFH	P08603	1231 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	ADD2	P35612	726 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	PLCB3	Q01970	1234 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	MGAT3	Q09327	533 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	APOBR	Q0VD83	1088 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	OS9	Q13438	667 aa	Predicted RBP	7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	HSDL1	Q3SXM5	330 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	MYSM1	Q5VVJ2	828 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	PLPP4	Q5VZY2	271 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	XRRA1	Q6P2D8	792 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	BTNL9	Q6UXG8	535 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	UNQ6494/PRO21346	Q6UXR6	183 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	ZNF687	Q8N1G0	1237 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	C12orf76	Q8N812	135 aa	Predicted RBP	7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	NEDD1	Q8NHV4	660 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	SSH3	Q8TE77	659 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	ATRIP	Q8WXE1	791 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	ACSF2	Q96CM8	615 aa	Predicted RBP	7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	TCF25	Q9BQ70	676 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	ISY1	Q9ULR0	285 aa	Known RBP	7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	RALGAPA2	Q2PPJ7	1873 aa		7.34	□□□□□ -1.23
BBS4-218	ENST00000569440	ATG2A	Q2TAZ0	1938 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440		H3BRB1	525 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	GOLIM4	O00461	696 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	LRP3	O75074	770 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	CLASP2	O75122	1294 aa	Known RBP	7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	PRDM1	O75626	825 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	STAG3L1	P0CL83	205 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	GNAT1	P11488	350 aa		7.33	□□□□□ -1.24
BBS4-218	ENST00000569440	GATM	P50440	423 aa		7.33	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms