RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 EPHA7Q15375 998 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 NBPF20Q3BBV1 942 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 FAM47CQ5HY64 1035 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 FAM173BQ6P4H8 233 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 SLC39A5Q6ZMH5 540 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 TRIM50Q86XT4 487 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 CKAP2LQ8IYA6 745 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 IPO9Q96P70 1041 aaKnown RBP10.25□□□□□ -0.77
CHD9-219ENST00000569225 GABBR1Q9UBS5 961 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 TRPC6Q9Y210 931 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 TELO2Q9Y4R8 837 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 MYH7BA7E2Y1 1941 aa10.25□□□□□ -0.77
CHD9-219ENST00000569225 CENPFP49454 3210 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 HAS3O00219 553 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 TLR3O15455 904 aaKnown RBP10.24□□□□□ -0.77
CHD9-219ENST00000569225 P4HBP07237 508 aaKnown RBP10.24□□□□□ -0.77
CHD9-219ENST00000569225 GNAT1P11488 350 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 NASPP49321 788 aaPredicted RBP10.24□□□□□ -0.77
CHD9-219ENST00000569225 PSMC5P62195 406 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 CEBPZQ03701 1054 aaKnown RBP10.24□□□□□ -0.77
CHD9-219ENST00000569225 SPIRE1Q08AE8 756 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 SNX17Q15036 470 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 STK38Q15208 465 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 HAUS3Q68CZ6 603 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 SESTD1Q86VW0 696 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 CCDC60Q8IWA6 550 aaPredicted RBP10.24□□□□□ -0.77
CHD9-219ENST00000569225 SLC43A3Q8NBI5 491 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 USP28Q96RU2 1077 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 LRWD1Q9UFC0 647 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 MAFBQ9Y5Q3 323 aaPredicted RBP10.24□□□□□ -0.77
CHD9-219ENST00000569225 CLIC4Q9Y696 253 aa10.24□□□□□ -0.77
CHD9-219ENST00000569225 MORC2Q9Y6X9 1032 aaPredicted RBP10.24□□□□□ -0.77
CHD9-219ENST00000569225 DCDC2CA8MYV0 355 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 EML1O00423 815 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 YEATS4O95619 227 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 MARK3P27448 753 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 QARSP47897 775 aaKnown RBP10.23□□□□□ -0.77
CHD9-219ENST00000569225 SLC39A14Q15043 492 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 ATP8B4Q8TF62 1192 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 AK8Q96MA6 479 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 TOX2Q96NM4 488 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 PCYT2Q99447 389 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 ZSWIM4Q9H7M6 989 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 NRBP2Q9NSY0 501 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 NOD1Q9Y239 953 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 ZDHHC9Q9Y397 364 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 IGSF9BQ9UPX0 1349 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 NRCAMQ92823 1304 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 POTEB3A0JP26 581 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 C17orf102A2RUQ5 167 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 VWA3AA6NCI4 1184 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 POTEMA6NI47 508 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 HBP1O60381 514 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 PQBP1O60828 265 aaKnown RBP10.23□□□□□ -0.77
CHD9-219ENST00000569225 SMIM10L2AP0DMW4 78 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 SMIM10L2BP0DMW5 78 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 NCLP19338 710 aaKnown RBP10.23□□□□□ -0.77
CHD9-219ENST00000569225 LONP1P36776 959 aaKnown RBP10.23□□□□□ -0.77
CHD9-219ENST00000569225 CDK7P50613 346 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 RTP1P59025 263 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 KRT85P78386 507 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 PRKCEQ02156 737 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 PPFIA1Q13136 1202 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 PTPAQ15257 358 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 LRRC26Q2I0M4 334 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 FOXD4L6Q3SYB3 417 aaPredicted RBP10.23□□□□□ -0.77
CHD9-219ENST00000569225 TRIM60Q495X7 471 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 KRT79Q5XKE5 535 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 POTEBQ6S5H4 581 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 FOXD4L3Q6VB84 417 aaPredicted RBP10.23□□□□□ -0.77
CHD9-219ENST00000569225 ANKRD33Q7Z3H0 272 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 IGSF22Q8N9C0 903 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 KCNG4Q8TDN1 519 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
CHD9-219ENST00000569225 EIF2AK1Q9BQI3 630 aaKnown RBP10.23□□□□□ -0.77
CHD9-219ENST00000569225 FTOQ9C0B1 505 aaKnown RBP eCLIP10.23□□□□□ -0.77
CHD9-219ENST00000569225 CHMP5Q9NZZ3 219 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
CHD9-219ENST00000569225 ATP11BQ9Y2G3 1177 aa10.23□□□□□ -0.77
CHD9-219ENST00000569225 GRIN2DO15399 1336 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 RRN3P2A6NIE6 340 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 SPTLC2O15270 562 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 OATP04181 439 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 RGS19P49795 217 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 TLE2Q04725 743 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 DNM1Q05193 864 aaKnown RBP10.22□□□□□ -0.77
CHD9-219ENST00000569225 PLCB4Q15147 1175 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 XKR3Q5GH77 459 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 ZNF484Q5JVG2 852 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 TPH2Q8IWU9 490 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 PIAS4Q8N2W9 510 aaPredicted RBP10.22□□□□□ -0.77
CHD9-219ENST00000569225 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
CHD9-219ENST00000569225 BANK1Q8NDB2 785 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 HSD17B14Q9BPX1 270 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 LXNQ9BS40 222 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 POLR3CQ9BUI4 534 aaPredicted RBP10.22□□□□□ -0.77
CHD9-219ENST00000569225 RNPEPQ9H4A4 650 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 TUFT1Q9NNX1 390 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 HDAC6Q9UBN7 1215 aa10.22□□□□□ -0.77
CHD9-219ENST00000569225 GTF2IRD1Q9UHL9 959 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms