RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 CIITAP33076 1130 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 MGAT3Q09327 533 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 PPFIA1Q13136 1202 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 GRIK4Q16099 956 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 FAM26DQ5JW98 314 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 PPP2R2DQ66LE6 453 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.92□□□□□ -0.98
CDH3-209ENST00000569080 CCDC12Q8WUD4 166 aaPredicted RBP8.92□□□□□ -0.98
CDH3-209ENST00000569080 ZBTB10Q96DT7 871 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 ZNF274Q96GC6 653 aaPredicted RBP8.92□□□□□ -0.98
CDH3-209ENST00000569080 LARP6Q9BRS8 491 aaKnown RBP8.92□□□□□ -0.98
CDH3-209ENST00000569080 SLC28A3Q9HAS3 691 aa8.92□□□□□ -0.98
CDH3-209ENST00000569080 ABHD14A-ACY1A0A1B0GW23 586 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 GJB5O95377 273 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 CHRNA1P02708 482 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 GNAT1P11488 350 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 GNA11P29992 359 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 ANAPC15P60006 121 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 SETQ01105 290 aaPredicted RBP8.91□□□□□ -0.98
CDH3-209ENST00000569080 TAP1Q03518 808 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 SCRN1Q12765 414 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 PLCB4Q15147 1175 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 TAF2Q6P1X5 1199 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 ABHD15Q6UXT9 468 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.91□□□□□ -0.98
CDH3-209ENST00000569080 CCDC60Q8IWA6 550 aaPredicted RBP8.91□□□□□ -0.98
CDH3-209ENST00000569080 PIAS4Q8N2W9 510 aaPredicted RBP8.91□□□□□ -0.98
CDH3-209ENST00000569080 CCDC148Q8NFR7 591 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 DBF4BQ8NFT6 615 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 AIFM3Q96NN9 605 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 SDF4Q9BRK5 362 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 SMARCAD1Q9H4L7 1026 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 C6orf50Q9HD87 102 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 SH3GLB2Q9NR46 395 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 TUBE1Q9UJT0 475 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 TTC28Q96AY4 2481 aa8.91□□□□□ -0.98
CDH3-209ENST00000569080 ATG2AQ2TAZ0 1938 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 LOXHD1Q8IVV2 1947 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 STK36Q9NRP7 1315 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 IGSF9BQ9UPX0 1349 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.9□□□□□ -0.98
CDH3-209ENST00000569080 ZBTB42B2RXF5 422 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 IPO5O00410 1097 aaKnown RBP8.9□□□□□ -0.98
CDH3-209ENST00000569080 LPXNO60711 386 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 EFCAB14O75071 495 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 INSRRP14616 1297 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 KCNJ6P48051 423 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 MCTP2Q6DN12 878 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 PLPPR4Q7Z2D5 763 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 PLA2G4DQ86XP0 818 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 DAGLBQ8NCG7 672 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 TRAPPC12Q8WVT3 735 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 GLG1Q92896 1179 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 PDRG1Q9NUG6 133 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 TPCN1Q9ULQ1 816 aa8.9□□□□□ -0.98
CDH3-209ENST00000569080 PRRC2BQ5JSZ5 2229 aaKnown RBP8.9□□□□□ -0.98
CDH3-209ENST00000569080 NLRC5Q86WI3 1866 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 DDX39AO00148 427 aaKnown RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 TLL1O43897 1013 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 PFKFB2O60825 505 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 DEXIO95424 95 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 LARGE1O95461 756 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 CTDNEP1O95476 244 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 SEC24BO95487 1268 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 GHRP10912 638 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 POU3F3P20264 500 aaPredicted RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 ATP4AP20648 1035 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 STAT5BP51692 787 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 HTRA4P83105 476 aaPredicted RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 AKAP17AQ02040 695 aaKnown RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 ST3GAL1Q11201 340 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 STK3Q13188 491 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 IKBKEQ14164 716 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 LPIN1Q14693 890 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 PRR16Q569H4 304 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 ZNF746Q6NUN9 644 aaPredicted RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 TRIM22Q8IYM9 498 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 FAM177A1Q8N128 213 aaPredicted RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 BICD2Q8TD16 824 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 SP7Q8TDD2 431 aaPredicted RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 DNAJB3Q8WWF6 145 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 LINC01599Q8WXQ3 324 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 MBOAT7Q96N66 472 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 UIMC1Q96RL1 719 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 GAS2L1Q99501 681 aaPredicted RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 RC3H2Q9HBD1 1191 aaKnown RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 PRDM6Q9NQX0 595 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 PCDHA4Q9UN74 947 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 MYH9P35579 1960 aaKnown RBP8.89□□□□□ -0.99
CDH3-209ENST00000569080 RALGAPA2Q2PPJ7 1873 aa8.89□□□□□ -0.99
CDH3-209ENST00000569080 TTC3P53804 2025 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 POTEB3A0JP26 581 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 LINC01553A4QN01 128 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 RRN3P2A6NIE6 340 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 RFXAPO00287 272 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 CPLX1O14810 134 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 MSH4O15457 936 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 DTNBO60941 627 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 LINC00271P0C7V0 271 aa8.88□□□□□ -0.99
CDH3-209ENST00000569080 ZNF76P36508 570 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms