RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ZNF689Q96CS4 500 aaPredicted RBP17.13■□□□□ 0.33
USB1-214ENST00000568848 PCYT2Q99447 389 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 C11orf84Q9BUA3 381 aaPredicted RBP17.13■□□□□ 0.33
USB1-214ENST00000568848 MAP3K20Q9NYL2 800 aaKnown RBP17.13■□□□□ 0.33
USB1-214ENST00000568848 CLEC1BQ9P126 229 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
USB1-214ENST00000568848 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
USB1-214ENST00000568848 CAND2O75155 1236 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 DGKIO75912 1065 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 GLP2RO95838 553 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 GNAT1P11488 350 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 ITGB5P18084 799 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 NDUFV1P49821 464 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 SMAD4Q13485 552 aaKnown RBP17.12■□□□□ 0.33
USB1-214ENST00000568848 WTAPQ15007 396 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 TMEM266Q2M3C6 531 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 TICAM2Q86XR7 235 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 KLHL23Q8NBE8 558 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 FAM86C1Q9NVL1 165 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 CD207Q9UJ71 328 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 TUBE1Q9UJT0 475 aa17.12■□□□□ 0.33
USB1-214ENST00000568848 E7EWF7 191 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 PER2O15055 1255 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 MMP1P03956 469 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 NRIP1P48552 1158 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 ADAM15Q13444 863 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 PCNX4Q63HM2 1172 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 SPPL3Q8TCT6 385 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 CLP1Q92989 425 aaKnown RBP17.11■□□□□ 0.33
USB1-214ENST00000568848 PGBD1Q96JS3 809 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 NRCAMQ92823 1304 aa17.11■□□□□ 0.33
USB1-214ENST00000568848 SP100P23497 879 aaPredicted RBP17.1■□□□□ 0.33
USB1-214ENST00000568848 MRPS6P82932 125 aaKnown RBP17.1■□□□□ 0.33
USB1-214ENST00000568848 HERC4Q5GLZ8 1057 aaPredicted RBP17.1■□□□□ 0.33
USB1-214ENST00000568848 VN1R2Q8NFZ6 395 aa17.1■□□□□ 0.33
USB1-214ENST00000568848 GLG1Q92896 1179 aa17.1■□□□□ 0.33
USB1-214ENST00000568848 MSLNLQ96KJ4 702 aa17.1■□□□□ 0.33
USB1-214ENST00000568848 PPP1R16BQ96T49 567 aa17.1■□□□□ 0.33
USB1-214ENST00000568848 APOL5Q9BWW9 433 aa17.1■□□□□ 0.33
USB1-214ENST00000568848 TMX1Q9H3N1 280 aa17.1■□□□□ 0.33
USB1-214ENST00000568848 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
USB1-214ENST00000568848 MYO15AQ9UKN7 3530 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 HIP1O00291 1037 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 RB1P06400 928 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 INSRRP14616 1297 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 TRDNQ13061 729 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 TSHZ1Q6ZSZ6 1077 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 SRBD1Q8N5C6 995 aaKnown RBP17.09■□□□□ 0.33
USB1-214ENST00000568848 CYP2W1Q8TAV3 490 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 IGDCC4Q8TDY8 1250 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 POF1BQ8WVV4 589 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 LMAN2LQ9H0V9 348 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 FAM50BQ9Y247 325 aa17.09■□□□□ 0.33
USB1-214ENST00000568848 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
USB1-214ENST00000568848 MBLAC1A4D2B0 266 aaPredicted RBP17.08■□□□□ 0.32
USB1-214ENST00000568848 TMEM221A6NGB7 291 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 M0R296 226 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 MGEA5O60502 916 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 VCPP55072 806 aaKnown RBP17.08■□□□□ 0.32
USB1-214ENST00000568848 RALYLQ86SE5 291 aaKnown RBP17.08■□□□□ 0.32
USB1-214ENST00000568848 MB21D2Q8IYB1 491 aaPredicted RBP17.08■□□□□ 0.32
USB1-214ENST00000568848 ZNF654Q8IZM8 581 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 CRIPAKQ8N1N5 446 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 SAMD3Q8N6K7 520 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 RPGRIP1Q96KN7 1286 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 CDHR5Q9HBB8 845 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 LY9Q9HBG7 655 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
USB1-214ENST00000568848 CFAP54Q96N23 3096 aa17.08■□□□□ 0.32
USB1-214ENST00000568848 ZFHX2Q9C0A1 2572 aaPredicted RBP17.07■□□□□ 0.32
USB1-214ENST00000568848 ERICH2A1L162 156 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 NT5C2P49902 561 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 TAF2Q6P1X5 1199 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 CATIPQ7Z7H3 387 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 NLRX1Q86UT6 975 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 SEPT1Q8WYJ6 367 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 EDAQ92838 391 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 CUL5Q93034 780 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 RRP36Q96EU6 259 aaKnown RBP17.07■□□□□ 0.32
USB1-214ENST00000568848 SENP7Q9BQF6 1050 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 PADI3Q9ULW8 664 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 TRPC6Q9Y210 931 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 GINS2Q9Y248 185 aa17.07■□□□□ 0.32
USB1-214ENST00000568848 DMDP11532 3685 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 CACNA1HO95180 2353 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 STAM2O75886 525 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 PDGFBP01127 241 aaPredicted RBP17.06■□□□□ 0.32
USB1-214ENST00000568848 TCF15Q12870 199 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 TTC22Q5TAA0 569 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 TRIM67Q6ZTA4 783 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 PBXIP1Q96AQ6 731 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
USB1-214ENST00000568848 ERAP1Q9NZ08 941 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 TRPV2Q9Y5S1 764 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms