RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 LINC01599Q8WXQ3 324 aa17.8■□□□□ 0.44
NME3-211ENST00000568561 TMEM87BQ96K49 555 aa17.8■□□□□ 0.44
NME3-211ENST00000568561 RC3H2Q9HBD1 1191 aaKnown RBP17.8■□□□□ 0.44
NME3-211ENST00000568561 CLDND1Q9NY35 253 aa17.8■□□□□ 0.44
NME3-211ENST00000568561 PCDHA6Q9UN73 950 aa17.8■□□□□ 0.44
NME3-211ENST00000568561 PCDHA8Q9Y5H6 950 aa17.8■□□□□ 0.44
NME3-211ENST00000568561 SLC12A7Q9Y666 1083 aa17.8■□□□□ 0.44
NME3-211ENST00000568561 CDY2AQ9Y6F7 541 aa17.8■□□□□ 0.44
NME3-211ENST00000568561 MBLAC1A4D2B0 266 aaPredicted RBP17.79■□□□□ 0.44
NME3-211ENST00000568561 PI4K2BG5E9Z4 385 aa17.79■□□□□ 0.44
NME3-211ENST00000568561 GPR37L1O60883 481 aa17.79■□□□□ 0.44
NME3-211ENST00000568561 TMEM62Q0P6H9 643 aa17.79■□□□□ 0.44
NME3-211ENST00000568561 CREB3L3Q68CJ9 461 aa17.79■□□□□ 0.44
NME3-211ENST00000568561 RPAINQ86UA6 219 aa17.79■□□□□ 0.44
NME3-211ENST00000568561 RSPH3Q86UC2 560 aa17.79■□□□□ 0.44
NME3-211ENST00000568561 TRAPPC12Q8WVT3 735 aa17.79■□□□□ 0.44
NME3-211ENST00000568561 PABPC5Q96DU9 382 aaKnown RBP17.79■□□□□ 0.44
NME3-211ENST00000568561 PCYT2Q99447 389 aa17.79■□□□□ 0.44
NME3-211ENST00000568561 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
NME3-211ENST00000568561 AGO3Q9H9G7 860 aaKnown RBP17.79■□□□□ 0.44
NME3-211ENST00000568561 ENPP3O14638 875 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 CALM1P0DP23 149 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 CALM2P0DP24 149 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 CALM3P0DP25 149 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 INSRRP14616 1297 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 CD52P31358 61 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 LIFRP42702 1097 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 MRPS6P82932 125 aaKnown RBP17.78■□□□□ 0.44
NME3-211ENST00000568561 CLUL1Q15846 466 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 WWC2Q6AWC2 1192 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 TYW1BQ6NUM6 668 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 TMTC2Q8N394 836 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 FANCBQ8NB91 859 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 CYP2W1Q8TAV3 490 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 ESYT1Q9BSJ8 1104 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 SMARCAD1Q9H4L7 1026 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 JPH1Q9HDC5 661 aaPredicted RBP17.78■□□□□ 0.44
NME3-211ENST00000568561 ANO2Q9NQ90 1003 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 JADE2Q9NQC1 790 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 TRPC6Q9Y210 931 aa17.78■□□□□ 0.44
NME3-211ENST00000568561 CNTNAP5Q8WYK1 1306 aa17.77■□□□□ 0.44
NME3-211ENST00000568561 IBSPP21815 317 aaPredicted RBP17.77■□□□□ 0.44
NME3-211ENST00000568561 BMPR1AP36894 532 aa17.77■□□□□ 0.44
NME3-211ENST00000568561 BTG3Q14201 252 aaPredicted RBP17.77■□□□□ 0.44
NME3-211ENST00000568561 TSHZ1Q6ZSZ6 1077 aa17.77■□□□□ 0.44
NME3-211ENST00000568561 SKAP1Q86WV1 359 aa17.77■□□□□ 0.44
NME3-211ENST00000568561 TCEANC2Q96MN5 208 aa17.77■□□□□ 0.44
NME3-211ENST00000568561 C11orf84Q9BUA3 381 aaPredicted RBP17.77■□□□□ 0.44
NME3-211ENST00000568561 KCNH7Q9NS40 1196 aa17.77■□□□□ 0.44
NME3-211ENST00000568561 SLC9A2Q9UBY0 812 aa17.77■□□□□ 0.44
NME3-211ENST00000568561 PLXNA4Q9HCM2 1894 aa17.76■□□□□ 0.43
NME3-211ENST00000568561 C5orf67F2Z3F1 127 aa17.76■□□□□ 0.43
NME3-211ENST00000568561 GTF2F1P35269 517 aaKnown RBP eCLIP17.76■□□□□ 0.434e-7■■■□□ 18.9
NME3-211ENST00000568561 LTBRP36941 435 aa17.76■□□□□ 0.43
NME3-211ENST00000568561 DLX2Q07687 328 aaPredicted RBP17.76■□□□□ 0.43
NME3-211ENST00000568561 COL19A1Q14993 1142 aa17.76■□□□□ 0.43
NME3-211ENST00000568561 EVPLQ92817 2033 aa17.76■□□□□ 0.43
NME3-211ENST00000568561 ARP10275 920 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 NAPAP54920 295 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 ACTR2P61160 394 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 ZP2Q05996 745 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 HYAL1Q12794 435 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 ITGB3BPQ13352 177 aaPredicted RBP17.75■□□□□ 0.43
NME3-211ENST00000568561 PLCB4Q15147 1175 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 NECTIN1Q15223 517 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 PUS10Q3MIT2 529 aaKnown RBP17.75■□□□□ 0.43
NME3-211ENST00000568561 PAN2Q504Q3 1202 aaKnown RBP17.75■□□□□ 0.43
NME3-211ENST00000568561 RTN4RL1Q86UN2 441 aaPredicted RBP17.75■□□□□ 0.43
NME3-211ENST00000568561 CLP1Q92989 425 aaKnown RBP17.75■□□□□ 0.43
NME3-211ENST00000568561 ZNF689Q96CS4 500 aaPredicted RBP17.75■□□□□ 0.43
NME3-211ENST00000568561 MXRA8Q9BRK3 442 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 AZI2Q9H6S1 392 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 ALG13Q9NP73 1137 aaKnown RBP17.75■□□□□ 0.43
NME3-211ENST00000568561 TMEM260Q9NX78 707 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 MRPL42Q9Y6G3 142 aaKnown RBP17.75■□□□□ 0.43
NME3-211ENST00000568561 PIEZO1Q92508 2521 aa17.75■□□□□ 0.43
NME3-211ENST00000568561 RRN3P2A6NIE6 340 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 LINC01565O15544 149 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 DGKIO75912 1065 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 RB1P06400 928 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 GATMP50440 423 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 APOA5Q6Q788 366 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 SGMS1Q86VZ5 419 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 UIMC1Q96RL1 719 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 ANO3Q9BYT9 981 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 IGFLR1Q9H665 355 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 RWDD3Q9Y3V2 267 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 TRPV2Q9Y5S1 764 aa17.74■□□□□ 0.43
NME3-211ENST00000568561 POTEB3A0JP26 581 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 DDX39AO00148 427 aaKnown RBP17.73■□□□□ 0.43
NME3-211ENST00000568561 TBX10O75333 385 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 ADCY7P51828 1080 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 TMEM266Q2M3C6 531 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 POTEBQ6S5H4 581 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 SDF4Q9BRK5 362 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 LMAN2LQ9H0V9 348 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 RIC8AQ9NPQ8 531 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 BRPF3Q9ULD4 1205 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 PADI3Q9ULW8 664 aa17.73■□□□□ 0.43
NME3-211ENST00000568561 FNDC1Q4ZHG4 1894 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms