RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 RAVER2Q9HCJ3 691 aaKnown RBP16.29■□□□□ 0.2
COMMD4-221ENST00000567935 OGDHLQ9ULD0 1010 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 RLFQ13129 1914 aa16.29■□□□□ 0.2
COMMD4-221ENST00000567935 BICDL2A1A5D9 508 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 FOSL2P15408 326 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
COMMD4-221ENST00000567935 PPP2R5CQ13362 524 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 CDKAL1Q5VV42 579 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 PCNX4Q63HM2 1172 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 KLHL10Q6JEL2 608 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 CPXCR1Q8N123 301 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 CCDC150Q8NCX0 1101 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 REPS2Q8NFH8 660 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 NEK9Q8TD19 979 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 LRRC15Q8TF66 581 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 TBC1D5Q92609 795 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 ATG4CQ96DT6 458 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 MXRA8Q9BRK3 442 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 TUFT1Q9NNX1 390 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 VAV3Q9UKW4 847 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 CTNND2Q9UQB3 1225 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
COMMD4-221ENST00000567935 NFIBO00712 420 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 CXCL11O14625 94 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 NRDCO43847 1150 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 HMGCRP04035 888 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 TAL1P17542 331 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-221ENST00000567935 PDE4DQ08499 809 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 MCM6Q14566 821 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 FILIP1LQ4L180 1135 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 LRCH2Q5VUJ6 765 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 NCAPH2Q6IBW4 605 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 CCDC186Q7Z3E2 898 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 MB21D1Q8N884 522 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 SYTL5Q8TDW5 730 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-221ENST00000567935 NELFBQ8WX92 580 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 TRERF1Q96PN7 1200 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 TEX13BQ9BXU2 312 aa16.27■□□□□ 0.2
COMMD4-221ENST00000567935 HMX1Q9NP08 348 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-221ENST00000567935 PTPRFP10586 1907 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 MYMKA6NI61 221 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 PSMD10O75832 226 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 COL6A1P12109 1028 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 ATP1A3P13637 1013 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 PRCPP42785 496 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 RNF207Q6ZRF8 634 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 TRMT44Q8IYL2 757 aaKnown RBP16.26■□□□□ 0.19
COMMD4-221ENST00000567935 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-221ENST00000567935 NUDT12Q9BQG2 462 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 TEKT3Q9BXF9 490 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 RRAGDQ9NQL2 400 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-221ENST00000567935 RNF146Q9NTX7 359 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.26■□□□□ 0.19
COMMD4-221ENST00000567935 DNM3Q9UQ16 869 aa16.26■□□□□ 0.19
COMMD4-221ENST00000567935 GAS7O60861 476 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 KIF20AO95235 890 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 PLA2G4BP0C869 781 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 PTGS1P23219 599 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 CCDC65Q8IXS2 484 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 SMYD4Q8IYR2 804 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-221ENST00000567935 MED15Q96RN5 788 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 THAP9Q9H5L6 903 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 ZNF214Q9UL59 606 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-221ENST00000567935 KIAA1024Q9UPX6 916 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 GDAQ9Y2T3 454 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 UBIAD1Q9Y5Z9 338 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 LOC285556D6RIA3 1793 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 LOXHD1Q8IVV2 1947 aa16.25■□□□□ 0.19
COMMD4-221ENST00000567935 A0A1B0GTH6 734 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 POTEB3A0JP26 581 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 MED24O75448 989 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 CCNE1P24864 410 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
COMMD4-221ENST00000567935 MUM1L1Q5H9M0 696 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 POTEBQ6S5H4 581 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 CATSPER3Q86XQ3 398 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 VSTM4Q8IW00 320 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 FAM114A1Q8IWE2 563 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 GUF1Q8N442 669 aaKnown RBP16.24■□□□□ 0.19
COMMD4-221ENST00000567935 CHST13Q8NET6 341 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 DDX12PQ92771 950 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 ZNF577Q9BSK1 485 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 ACAD9Q9H845 621 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 JADE2Q9NQC1 790 aa16.24■□□□□ 0.19
COMMD4-221ENST00000567935 SAMSN1Q9NSI8 373 aaKnown RBP16.24■□□□□ 0.19
COMMD4-221ENST00000567935 LIMA1Q9UHB6 759 aaKnown RBP16.24■□□□□ 0.19
COMMD4-221ENST00000567935 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-221ENST00000567935 A0A0G2JLL6 359 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 LRRC10BA6NIK2 292 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 IPO5O00410 1097 aaKnown RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 MAFGO15525 162 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 STAM2O75886 525 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 FGFR1OPO95684 399 aaKnown RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 SPATA31C1P0DKV0 1188 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 EEF1GP26641 437 aaKnown RBP16.23■□□□□ 0.19
COMMD4-221ENST00000567935 STAT3P40763 770 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 EHHADHQ08426 723 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 EPHA7Q15375 998 aa16.23■□□□□ 0.19
COMMD4-221ENST00000567935 ECM1Q16610 540 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms