RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 SWSAP1Q6NVH7 229 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 PDXDC2PQ6P474 469 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 MIER3Q7Z3K6 550 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 CCDC60Q8IWA6 550 aaPredicted RBP14.36□□□□□ -0.11
GINS3-209ENST00000567909 HAS1Q92839 578 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 ATP6V0A1Q93050 837 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 FAM20AQ96MK3 541 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 KCNMB3Q9NPA1 279 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 ZNF302Q9NR11 478 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 DISC1Q9NRI5 854 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 SETD4Q9NVD3 440 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 PCDHA10Q9Y5I2 948 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 SCN5AQ14524 2016 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 EVPLQ92817 2033 aa14.36□□□□□ -0.11
GINS3-209ENST00000567909 TBX3O15119 743 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 TIMP1P01033 207 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 PDCP20941 246 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 SFNP31947 248 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 CYP2C18P33260 490 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 JAK3P52333 1124 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 IGBP1P78318 339 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 HIC1Q14526 733 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 NBR1Q14596 966 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 TTC38Q5R3I4 469 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 PLPPR4Q7Z2D5 763 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 TRMT1LQ7Z2T5 733 aaKnown RBP14.35□□□□□ -0.11
GINS3-209ENST00000567909 CKAP2LQ8IYA6 745 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 SPRYD3Q8NCJ5 442 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 NOC4LQ9BVI4 516 aaKnown RBP14.35□□□□□ -0.11
GINS3-209ENST00000567909 GABBR1Q9UBS5 961 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 UMODL1Q5DID0 1318 aa14.35□□□□□ -0.11
GINS3-209ENST00000567909 IGKV6D-21A0A0A0MT36 114 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 TREHO43280 583 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 GNAT1P11488 350 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 CCL23P55773 120 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 PPFIA1Q13136 1202 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 PLCB4Q15147 1175 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 NCAPH2Q6IBW4 605 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 SLFN12Q8IYM2 578 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 LMBR1Q8WVP7 490 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 CTAGE1Q96RT6 745 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 VAV3Q9UKW4 847 aa14.34□□□□□ -0.11
GINS3-209ENST00000567909 TANC1Q9C0D5 1861 aa14.33□□□□□ -0.11
GINS3-209ENST00000567909 POTEB3A0JP26 581 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 INSRRP14616 1297 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 SYT1P21579 422 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 TXKP42681 527 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 BFSP2Q13515 415 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 GRIK4Q16099 956 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 POTEBQ6S5H4 581 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 FERMT3Q86UX7 667 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 CCDC155Q8N6L0 562 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 RETREG2Q8NC44 543 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 AFAP1L1Q8TED9 768 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 GDF15Q99988 308 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 UBE2OQ9C0C9 1292 aaKnown RBP14.33□□□□□ -0.12
GINS3-209ENST00000567909 TMEM60Q9H2L4 133 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 NRCAMQ92823 1304 aa14.33□□□□□ -0.12
GINS3-209ENST00000567909 EML1O00423 815 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 ATP4AP20648 1035 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 HOXC8P31273 242 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 SLC26A2P50443 739 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 TOB1P50616 345 aaPredicted RBP14.32□□□□□ -0.12
GINS3-209ENST00000567909 FPGSQ05932 587 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 PTK7Q13308 1070 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 PPP2R5CQ13362 524 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 UGCGQ16739 394 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 MFSD5Q6N075 450 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 B3GNT9Q6UX72 402 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 TMEM199Q8N511 208 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 RDM1Q8NG50 284 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 ATP8B4Q8TF62 1192 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 TRAPPC12Q8WVT3 735 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 DHX38Q92620 1227 aaKnown RBP14.32□□□□□ -0.12
GINS3-209ENST00000567909 TNPO1Q92973 898 aaKnown RBP14.32□□□□□ -0.12
GINS3-209ENST00000567909 WNT8BQ93098 351 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 SCLYQ96I15 445 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 MTMR9Q96QG7 549 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 TTC12Q9H892 705 aaPredicted RBP14.32□□□□□ -0.12
GINS3-209ENST00000567909 TUBE1Q9UJT0 475 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 PCDHA12Q9UN75 941 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 COLQQ9Y215 455 aaPredicted RBP14.32□□□□□ -0.12
GINS3-209ENST00000567909 PCDHB6Q9Y5E3 794 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 MAFBQ9Y5Q3 323 aaPredicted RBP14.32□□□□□ -0.12
GINS3-209ENST00000567909 IGSF9BQ9UPX0 1349 aa14.32□□□□□ -0.12
GINS3-209ENST00000567909 LOXHD1Q8IVV2 1947 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 HBP1O60381 514 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 OR52Z1P0C646 297 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 CSF2RAP15509 400 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 PRKCEQ02156 737 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 ORC2Q13416 577 aaPredicted RBP14.31□□□□□ -0.12
GINS3-209ENST00000567909 SERINC5Q86VE9 423 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 BANK1Q8NDB2 785 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 CAGE1Q8TC20 777 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 ZBTB10Q96DT7 871 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
GINS3-209ENST00000567909 TRIOBPQ9H2D6 2365 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms