RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RUFY3Q7L099 469 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 SERINC5Q86VE9 423 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ZNF687Q8N1G0 1237 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 MAFAQ8NHW3 353 aaPredicted RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 CCDC12Q8WUD4 166 aaPredicted RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 SEPT1Q8WYJ6 367 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ATP6V0A1Q93050 837 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 GAS2L1Q99501 681 aaPredicted RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 MXRA8Q9BRK3 442 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ANO3Q9BYT9 981 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ZMYND12Q9H0C1 365 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 RNPEPQ9H4A4 650 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 SLC28A3Q9HAS3 691 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ZSWIM6Q9HCJ5 1215 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 PPP4R2Q9NY27 417 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 ERAP1Q9NZ08 941 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 YBX2Q9Y2T7 364 aaKnown RBP5.47□□□□□ -1.53
CLK3-219ENST00000567805 CYP46A1Q9Y6A2 500 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 RALGAPA2Q2PPJ7 1873 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 NFASCO94856 1347 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 NRCAMQ92823 1304 aa5.47□□□□□ -1.53
CLK3-219ENST00000567805 MYO9BQ13459 2157 aa5.46□□□□□ -1.53
CLK3-219ENST00000567805 ABHD14A-ACY1A0A1B0GW23 586 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 GSTTP1A0A1W2PQM5 241 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 RSPH10B2B2RC85 870 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 KIF28PB7ZC32 967 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 TREHO43280 583 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 NBNO60934 754 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 LGR5O75473 907 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 RSPH10BP0C881 870 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 IFNAR1P17181 557 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 GNA11P29992 359 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 PDIA3P30101 505 aaKnown RBP5.46□□□□□ -1.54
CLK3-219ENST00000567805 ZNF76P36508 570 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 SREBF1P36956 1147 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 THPOP40225 353 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 KCNJ6P48051 423 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 RABGGTBP53611 331 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 WDR5P61964 334 aaKnown RBP5.46□□□□□ -1.54
CLK3-219ENST00000567805 ADAM17P78536 824 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 AKAP17AQ02040 695 aaKnown RBP5.46□□□□□ -1.54
CLK3-219ENST00000567805 TOB2Q14106 344 aaPredicted RBP5.46□□□□□ -1.54
CLK3-219ENST00000567805 IKBKEQ14164 716 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 NTRK3Q16288 839 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 PKN1Q16512 942 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 UTP14CQ5TAP6 766 aaKnown RBP5.46□□□□□ -1.54
CLK3-219ENST00000567805 PPP2R2DQ66LE6 453 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 TRAF7Q6Q0C0 670 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 NIPA1Q7RTP0 329 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 TRIM50Q86XT4 487 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 HERC6Q8IVU3 1022 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.46□□□□□ -1.54
CLK3-219ENST00000567805 BICD2Q8TD16 824 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 LMBR1Q8WVP7 490 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 WNT8BQ93098 351 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 PHKBQ93100 1093 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 ZNF274Q96GC6 653 aaPredicted RBP5.46□□□□□ -1.54
CLK3-219ENST00000567805 PGBD1Q96JS3 809 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 SDF4Q9BRK5 362 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 RNF26Q9BY78 433 aaPredicted RBP5.46□□□□□ -1.54
CLK3-219ENST00000567805 TM6SF1Q9BZW5 370 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 NKX2-4Q9H2Z4 354 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 SMARCAD1Q9H4L7 1026 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 C6orf50Q9HD87 102 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 JPH1Q9HDC5 661 aaPredicted RBP5.46□□□□□ -1.54
CLK3-219ENST00000567805 KCNH7Q9NS40 1196 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 SETD4Q9NVD3 440 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 PKD2L1Q9P0L9 805 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 SLC9A2Q9UBY0 812 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 TELO2Q9Y4R8 837 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 EVPLQ92817 2033 aa5.46□□□□□ -1.54
CLK3-219ENST00000567805 COL4A6Q14031 1691 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 MEIS1O00470 390 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 TLL1O43897 1013 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 EIF5BO60841 1220 aaKnown RBP5.45□□□□□ -1.54
CLK3-219ENST00000567805 RPLP2P05387 115 aaKnown RBP5.45□□□□□ -1.54
CLK3-219ENST00000567805 CA3P07451 260 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 CYP3A4P08684 503 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 ARP10275 920 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 MYOGP15173 224 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 MARK3P27448 753 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 SLC26A2P50443 739 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 ACTR2P61160 394 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 CCT2P78371 535 aaKnown RBP5.45□□□□□ -1.54
CLK3-219ENST00000567805 DEFB103AP81534 67 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 ARHGAP4P98171 946 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 SETQ01105 290 aaPredicted RBP5.45□□□□□ -1.54
CLK3-219ENST00000567805 PPFIA1Q13136 1202 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 ITGB3BPQ13352 177 aaPredicted RBP5.45□□□□□ -1.54
CLK3-219ENST00000567805 MBTPS1Q14703 1052 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 PLEKHG4Q58EX7 1191 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 JAKMIP3Q5VZ66 844 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 TAF2Q6P1X5 1199 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 PLPPR4Q7Z2D5 763 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 RPAINQ86UA6 219 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 TRIM22Q8IYM9 498 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 FAM177A1Q8N128 213 aaPredicted RBP5.45□□□□□ -1.54
CLK3-219ENST00000567805 REXO1Q8N1G1 1221 aaKnown RBP5.45□□□□□ -1.54
CLK3-219ENST00000567805 CCDC148Q8NFR7 591 aa5.45□□□□□ -1.54
CLK3-219ENST00000567805 CYP2W1Q8TAV3 490 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms