RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 PRR16Q569H4 304 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 GPATCH4Q5T3I0 446 aaKnown RBP15.62■□□□□ 0.09
CDH1-209ENST00000566510 ARHGAP27Q6ZUM4 889 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 AIPL1Q9NZN9 384 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 ARMCX3Q9UH62 379 aaPredicted RBP15.62■□□□□ 0.09
CDH1-209ENST00000566510 PCDHGC5Q9Y5F6 944 aa15.62■□□□□ 0.09
CDH1-209ENST00000566510 ZNF233A6NK53 670 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 RAD51CO43502 376 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 HOXA7P31268 230 aaPredicted RBP15.61■□□□□ 0.09
CDH1-209ENST00000566510 SNAP25P60880 206 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 PSMC6P62333 389 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 TNNC1P63316 161 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 ARSHQ5FYA8 562 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 ZNF831Q5JPB2 1677 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 ZNF571Q7Z3V5 609 aaPredicted RBP15.61■□□□□ 0.09
CDH1-209ENST00000566510 USP38Q8NB14 1042 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 AP1M1Q9BXS5 423 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 GANQ9H2C0 597 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 BTAF1O14981 1849 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.61■□□□□ 0.09
CDH1-209ENST00000566510 IGKV6D-41A0A0C4DH26 115 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 FAM196BA6NMK8 535 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 SERPINB2P05120 415 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 GUCY1A3Q02108 690 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 CDC37Q16543 378 aaPredicted RBP15.61■□□□□ 0.09
CDH1-209ENST00000566510 EXOC3L4Q17RC7 722 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 QRICH1Q2TAL8 776 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 FOXR2Q6PJQ5 311 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 TADA2BQ86TJ2 420 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 INPP4AQ96PE3 977 aaPredicted RBP15.61■□□□□ 0.09
CDH1-209ENST00000566510 ANO3Q9BYT9 981 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 FAM107BQ9H098 131 aa15.61■□□□□ 0.09
CDH1-209ENST00000566510 PLIN4Q96Q06 1357 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 XRCC5P13010 732 aaKnown RBP15.6■□□□□ 0.09
CDH1-209ENST00000566510 UCHL3P15374 230 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 SHMT1P34896 483 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 CYP4A11Q02928 519 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 HYIQ5T013 277 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 CATSPER3Q86XQ3 398 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 IQCKQ8N0W5 287 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 DHX36Q9H2U1 1008 aaKnown RBP15.6■□□□□ 0.09
CDH1-209ENST00000566510 DNM3Q9UQ16 869 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 ARFGEF1Q9Y6D6 1849 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 A0A087WUV0 522 aaPredicted RBP15.6■□□□□ 0.09
CDH1-209ENST00000566510 SLC12A3P55017 1021 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 MARSP56192 900 aaKnown RBP15.6■□□□□ 0.09
CDH1-209ENST00000566510 IKQ13123 557 aaPredicted RBP15.6■□□□□ 0.09
CDH1-209ENST00000566510 USH1GQ495M9 461 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 SFR1Q86XK3 245 aa15.6■□□□□ 0.09
CDH1-209ENST00000566510 RNPC3Q96LT9 517 aaKnown RBP15.6■□□□□ 0.09
CDH1-209ENST00000566510 CLIC2O15247 247 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 BBOX1O75936 387 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 AFPP02771 609 aaKnown RBP15.59■□□□□ 0.09
CDH1-209ENST00000566510 HLA-DOAP06340 250 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 MYBP10242 640 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 HPDP32754 393 aaPredicted RBP15.59■□□□□ 0.09
CDH1-209ENST00000566510 TCP10Q12799 353 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 CEP85LQ5SZL2 805 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 ALKBH5Q6P6C2 394 aaKnown RBP15.59■□□□□ 0.09
CDH1-209ENST00000566510 IRF2BP2Q7Z5L9 587 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 NAP1L4Q99733 375 aaKnown RBP15.59■□□□□ 0.09
CDH1-209ENST00000566510 REEP2Q9BRK0 252 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 SWAP70Q9UH65 585 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
CDH1-209ENST00000566510 EP400Q96L91 3159 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 DOK7Q18PE1 504 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 KNOP1Q1ED39 458 aaKnown RBP15.59■□□□□ 0.09
CDH1-209ENST00000566510 SHROOM1Q2M3G4 852 aaPredicted RBP15.59■□□□□ 0.09
CDH1-209ENST00000566510 EDRF1Q3B7T1 1238 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 DDX42Q86XP3 938 aaKnown RBP eCLIP15.59■□□□□ 0.09
CDH1-209ENST00000566510 PLAAQ9Y263 795 aa15.59■□□□□ 0.09
CDH1-209ENST00000566510 NHSQ6T4R5 1651 aa15.58■□□□□ 0.09
CDH1-209ENST00000566510 GOLGA6L10A6NI86 522 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 G3V3G9 751 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 ERLIN2O94905 339 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 KIF4AO95239 1232 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 NR1D1P20393 614 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 PON1P27169 355 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 GIT2Q14161 759 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 DCAF8Q5TAQ9 597 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 SLFN12Q8IYM2 578 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 WHAMMQ8TF30 809 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 PIK3R5Q8WYR1 880 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 KCNMB3Q9NPA1 279 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 NAGPAQ9UK23 515 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 PCDHB13Q9Y5F0 798 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 SFI1A8K8P3 1242 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 RSPH10B2B2RC85 870 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 GCNT3O95395 438 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 RSPH10BP0C881 870 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 USP11P51784 963 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 CACNB3P54284 484 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 SKOR1P84550 965 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 CRY2Q49AN0 593 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 GJB7Q6PEY0 223 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 CERS5Q8N5B7 392 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 TAF1DQ9H5J8 278 aaPredicted RBP15.58■□□□□ 0.08
CDH1-209ENST00000566510 BCAS3Q9H6U6 928 aa15.58■□□□□ 0.08
CDH1-209ENST00000566510 AKAP3O75969 853 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms