RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 PLCB4Q15147 1175 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 PTGISQ16647 500 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 NAA35Q5VZE5 725 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 HGSNATQ68CP4 663 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 ANKRD13CQ8N6S4 541 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 IFT81Q8WYA0 676 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 ASB16Q96NS5 453 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 IL17RBQ9NRM6 502 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 CES2O00748 559 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 CYTH3O43739 400 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 MDH1P40925 334 aaKnown RBP12.04□□□□□ -0.48
TCF4-232ENST00000566286 NAPAP54920 295 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 GSCP56915 257 aaPredicted RBP12.04□□□□□ -0.48
TCF4-232ENST00000566286 DDR1Q08345 913 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 ZNF211Q13398 564 aaPredicted RBP12.04□□□□□ -0.48
TCF4-232ENST00000566286 DRP2Q13474 957 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 NAB2Q15742 525 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 CDC37Q16543 378 aaPredicted RBP12.04□□□□□ -0.48
TCF4-232ENST00000566286 FAM182BQ5T319 152 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 SFMBT2Q5VUG0 894 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 ZNF473Q8WTR7 871 aaKnown RBP12.04□□□□□ -0.48
TCF4-232ENST00000566286 LARP4BQ92615 738 aaKnown RBP12.04□□□□□ -0.48
TCF4-232ENST00000566286 MS4A14Q96JA4 679 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 CDK5RAP3Q96JB5 506 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 MMTAG2Q9BU76 263 aaKnown RBP12.04□□□□□ -0.48
TCF4-232ENST00000566286 SPZ1Q9BXG8 430 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 CAPN10Q9HC96 672 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 A1CFQ9NQ94 594 aaKnown RBP12.04□□□□□ -0.48
TCF4-232ENST00000566286 PCDHGC5Q9Y5F6 944 aa12.04□□□□□ -0.48
TCF4-232ENST00000566286 COL24A1Q17RW2 1714 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L15C9J2P7 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L13C9JLJ4 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L11C9JVI0 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L18D6R9N7 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L22D6RA61 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L17D6RBQ6 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L19D6RCP7 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L20D6RJB6 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 H3BRB1 525 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 PALMO75781 387 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 FAM107AO95990 144 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 FAM153BP0C7A2 387 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 HSPA9P38646 679 aaKnown RBP12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L24Q0WX57 530 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 SF3B3Q15393 1217 aaKnown RBP12.03□□□□□ -0.48
TCF4-232ENST00000566286 FAM153CQ494X1 144 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 RC3H1Q5TC82 1133 aaKnown RBP12.03□□□□□ -0.48
TCF4-232ENST00000566286 MEI1Q5TIA1 1274 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 MEX3CQ5U5Q3 659 aaKnown RBP12.03□□□□□ -0.48
TCF4-232ENST00000566286 C12orf60Q5U649 245 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 PPP4R3AQ6IN85 833 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 LRIG3Q6UXM1 1119 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 LRRC55Q6ZSA7 311 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 RPAINQ86UA6 219 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 C3orf20Q8ND61 904 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 HPS3Q969F9 1004 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 RAB34Q9BZG1 259 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 TUT1Q9H6E5 874 aaKnown RBP12.03□□□□□ -0.48
TCF4-232ENST00000566286 MKNK2Q9HBH9 465 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 FAM153AQ9UHL3 310 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 ROBO3Q96MS0 1386 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 AFF2P51816 1311 aa12.03□□□□□ -0.48
TCF4-232ENST00000566286 USP17L3A6NCW0 530 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 USP17L4A6NCW7 530 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 MYMKA6NI61 221 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 TSPY3P0CV98 308 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 TSPY8P0CW00 308 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 HSPA1LP34931 641 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 GUCY1A3Q02108 690 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 TMEM266Q2M3C6 531 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 SLC35G1Q2M3R5 365 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 SOGA3Q5TF21 947 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 USP17L2Q6R6M4 530 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 PADI6Q6TGC4 694 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 SMIM5Q71RC9 77 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 USP17L1Q7RTZ2 530 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 NLRP14Q86W24 1093 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 MYCBPAPQ8TBZ2 947 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.48
TCF4-232ENST00000566286 KRT12Q99456 494 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 TACO1Q9BSH4 297 aaKnown RBP12.02□□□□□ -0.48
TCF4-232ENST00000566286 BLOC1S4Q9NUP1 217 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.48
TCF4-232ENST00000566286 ESYT3A0FGR9 886 aa12.02□□□□□ -0.49
TCF4-232ENST00000566286 SMCO2A6NFE2 343 aa12.02□□□□□ -0.49
TCF4-232ENST00000566286 KIF3CO14782 793 aa12.02□□□□□ -0.49
TCF4-232ENST00000566286 CD46P15529 392 aa12.02□□□□□ -0.49
TCF4-232ENST00000566286 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
TCF4-232ENST00000566286 GUCY2FP51841 1108 aa12.02□□□□□ -0.49
TCF4-232ENST00000566286 FKBP3Q00688 224 aaKnown RBP12.02□□□□□ -0.49
TCF4-232ENST00000566286 GRB10Q13322 594 aa12.02□□□□□ -0.49
TCF4-232ENST00000566286 ITGB3BPQ13352 177 aaPredicted RBP12.02□□□□□ -0.49
TCF4-232ENST00000566286 CUL1Q13616 776 aa12.02□□□□□ -0.49
TCF4-232ENST00000566286 SLC18A3Q16572 532 aa12.02□□□□□ -0.49
TCF4-232ENST00000566286 ERFEQ4G0M1 354 aa12.02□□□□□ -0.49
TCF4-232ENST00000566286 EAPPQ56P03 285 aaPredicted RBP12.02□□□□□ -0.49
TCF4-232ENST00000566286 SPTY2D1Q68D10 685 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms