RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 TAF2Q6P1X5 1199 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 CRIPAKQ8N1N5 446 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 DNAJB3Q8WWF6 145 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 MSLNLQ96KJ4 702 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 PLVAPQ9BX97 442 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 AGO3Q9H9G7 860 aaKnown RBP15.41■□□□□ 0.06
COMMD4-214ENST00000566230 CD207Q9UJ71 328 aa15.41■□□□□ 0.06
COMMD4-214ENST00000566230 PLXNA4Q9HCM2 1894 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 MBLAC1A4D2B0 266 aaPredicted RBP15.4■□□□□ 0.06
COMMD4-214ENST00000566230 STXBP3O00186 592 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 KCNA2P16389 499 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 PTH1RQ03431 593 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 TRDNQ13061 729 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 PPFIA1Q13136 1202 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 GRIK4Q16099 956 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 XRRA1Q6P2D8 792 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 ADGRD2Q7Z7M1 963 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 SPPL3Q8TCT6 385 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 ZBTB10Q96DT7 871 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 MFSD14AQ96MC6 490 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 POP1Q99575 1024 aaKnown RBP15.4■□□□□ 0.06
COMMD4-214ENST00000566230 CDY2AQ9Y6F7 541 aa15.4■□□□□ 0.06
COMMD4-214ENST00000566230 MRPL42Q9Y6G3 142 aaKnown RBP15.4■□□□□ 0.06
COMMD4-214ENST00000566230 CACNA1HO95180 2353 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 PIK3CDO00329 1044 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 EYA4O95677 639 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 ITGB1P05556 798 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 MARK3P27448 753 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 WTAPQ15007 396 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 RSPH3Q86UC2 560 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 NLRX1Q86UT6 975 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 GIMAP8Q8ND71 665 aaPredicted RBP15.39■□□□□ 0.05
COMMD4-214ENST00000566230 SMARCC2Q8TAQ2 1214 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 SEPT1Q8WYJ6 367 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 EDAQ92838 391 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 P2RX5Q93086 422 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 PHOX2BQ99453 314 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 CLEC1BQ9P126 229 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 TUBE1Q9UJT0 475 aa15.39■□□□□ 0.05
COMMD4-214ENST00000566230 SGSM2O43147 1006 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 ITGB5P18084 799 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 CD52P31358 61 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 ANTXR2P58335 489 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 MRPS6P82932 125 aaKnown RBP15.38■□□□□ 0.05
COMMD4-214ENST00000566230 TSHZ1Q6ZSZ6 1077 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 BMP8AQ7Z5Y6 402 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 IGDCC4Q8TDY8 1250 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 CUL5Q93034 780 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 GPRASP2Q96D09 838 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 ERAP1Q9NZ08 941 aa15.38■□□□□ 0.05
COMMD4-214ENST00000566230 ERICH2A1L162 156 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 E7EWF7 191 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 NDUFV1P49821 464 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 IER5LQ5T953 404 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 CATIPQ7Z7H3 387 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 CMTR2Q8IYT2 770 aaKnown RBP15.37■□□□□ 0.05
COMMD4-214ENST00000566230 EFHBQ8N7U6 833 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 KLHL23Q8NBE8 558 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 PRSS33Q8NF86 280 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 PCYT2Q99447 389 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 SPZ1Q9BXG8 430 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 UBIAD1Q9Y5Z9 338 aa15.37■□□□□ 0.05
COMMD4-214ENST00000566230 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-214ENST00000566230 ZFHX2Q9C0A1 2572 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-214ENST00000566230 FNDC1Q4ZHG4 1894 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-214ENST00000566230 KMT2EQ8IZD2 1858 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 LOC730098B7Z3J9 87 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 GLP2RO95838 553 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 INSRRP14616 1297 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 GATMP50440 423 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 IGBP1P78318 339 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 COASYQ13057 564 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 PAN2Q504Q3 1202 aaKnown RBP15.36■□□□□ 0.05
COMMD4-214ENST00000566230 NAALADL2Q58DX5 795 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 CASC1Q6TDU7 716 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 TRIM67Q6ZTA4 783 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 NPAS4Q8IUM7 802 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 SMRP1Q8NCR6 262 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 NCOA7Q8NI08 942 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 GLG1Q92896 1179 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 MAP4K1Q92918 833 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 RRP36Q96EU6 259 aaKnown RBP15.36■□□□□ 0.05
COMMD4-214ENST00000566230 MYL10Q9BUA6 226 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 FAM49AQ9H0Q0 323 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-214ENST00000566230 SMARCAD1Q9H4L7 1026 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 PKD2L1Q9P0L9 805 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 PCDHGC5Q9Y5F6 944 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 SQORQ9Y6N5 450 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 EVPLQ92817 2033 aa15.36■□□□□ 0.05
COMMD4-214ENST00000566230 USP34Q70CQ2 3546 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 TMEM221A6NGB7 291 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 M0R296 226 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 SMARCA1P28370 1054 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 NRIP1P48552 1158 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 TMEM62Q0P6H9 643 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 CBX2Q14781 532 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-214ENST00000566230 SART3Q15020 963 aaKnown RBP15.35■□□□□ 0.05
COMMD4-214ENST00000566230 RALYLQ86SE5 291 aaKnown RBP15.35■□□□□ 0.05
COMMD4-214ENST00000566230 SKAP1Q86WV1 359 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 MB21D2Q8IYB1 491 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms