RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 PCYT2Q99447 389 aa17.32■□□□□ 0.36
CMTM3-212ENST00000566121 SDF4Q9BRK5 362 aa17.32■□□□□ 0.36
CMTM3-212ENST00000566121 TM6SF1Q9BZW5 370 aa17.32■□□□□ 0.36
CMTM3-212ENST00000566121 AGO4Q9HCK5 861 aaKnown RBP17.32■□□□□ 0.36
CMTM3-212ENST00000566121 PTPRSQ13332 1948 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 BRWD1Q9NSI6 2320 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 EPOPA6NHQ4 379 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 CHRNA1P02708 482 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 IFNAR1P17181 557 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 CIITAP33076 1130 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 GRB10Q13322 594 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 GRIK4Q16099 956 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 PKN1Q16512 942 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 Q6ZUG5 572 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 CYP2W1Q8TAV3 490 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 ARNTL2Q8WYA1 636 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 GLG1Q92896 1179 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 TCEANC2Q96MN5 208 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 RNF26Q9BY78 433 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-212ENST00000566121 AZI2Q9H6S1 392 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 TUBE1Q9UJT0 475 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 PCDHA2Q9Y5H9 948 aa17.31■□□□□ 0.36
CMTM3-212ENST00000566121 MICAL3Q7RTP6 2002 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 KDM3AQ9Y4C1 1321 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-212ENST00000566121 LCHNA4D1U4 455 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 ARP10275 920 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 ACTR2P61160 394 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 FGD1P98174 961 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 ITGB3BPQ13352 177 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-212ENST00000566121 ABHD15Q6UXT9 468 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.3■□□□□ 0.36
CMTM3-212ENST00000566121 BICD2Q8TD16 824 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 BRF1Q92994 677 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 JAKMIP1Q96N16 626 aaKnown RBP17.3■□□□□ 0.36
CMTM3-212ENST00000566121 IFIH1Q9BYX4 1025 aaKnown RBP17.3■□□□□ 0.36
CMTM3-212ENST00000566121 ZSWIM6Q9HCJ5 1215 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 C6orf50Q9HD87 102 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 SH3GLB2Q9NR46 395 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 TBC1D22BQ9NU19 505 aa17.3■□□□□ 0.36
CMTM3-212ENST00000566121 IGLV3-22A0A075B6J6 115 aa17.29■□□□□ 0.36
CMTM3-212ENST00000566121 DHX15O43143 795 aaKnown RBP17.29■□□□□ 0.36
CMTM3-212ENST00000566121 INSRRP14616 1297 aa17.29■□□□□ 0.36
CMTM3-212ENST00000566121 STAT5BP51692 787 aa17.29■□□□□ 0.36
CMTM3-212ENST00000566121 IER5Q5VY09 327 aa17.29■□□□□ 0.36
CMTM3-212ENST00000566121 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
CMTM3-212ENST00000566121 SUGCTQ9HAC7 445 aa17.29■□□□□ 0.36
CMTM3-212ENST00000566121 PRDM6Q9NQX0 595 aa17.29■□□□□ 0.36
CMTM3-212ENST00000566121 DOCK5Q9H7D0 1870 aa17.29■□□□□ 0.36
CMTM3-212ENST00000566121 SMIM35A0A1B0GVV1 85 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 BMP1P13497 986 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 PDIA3P30101 505 aaKnown RBP17.28■□□□□ 0.36
CMTM3-212ENST00000566121 SETQ01105 290 aaPredicted RBP17.28■□□□□ 0.36
CMTM3-212ENST00000566121 SP4Q02446 784 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 APOBRQ0VD83 1088 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 PLCB4Q15147 1175 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 FBXO47Q5MNV8 452 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 RUFY3Q7L099 469 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 ZNF710Q8N1W2 664 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 ZNF274Q96GC6 653 aaPredicted RBP17.28■□□□□ 0.36
CMTM3-212ENST00000566121 FTHL17Q9BXU8 183 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 COL1A2P08123 1366 aa17.28■□□□□ 0.36
CMTM3-212ENST00000566121 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 TNFRSF10AO00220 468 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 RFXAPO00287 272 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 HBP1O60381 514 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 RB1P06400 928 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 USP11P51784 963 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 LPIN1Q14693 890 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 CCDC85BQ15834 202 aaPredicted RBP17.27■□□□□ 0.36
CMTM3-212ENST00000566121 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.36
CMTM3-212ENST00000566121 RUFY4Q6ZNE9 571 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 TSHZ1Q6ZSZ6 1077 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 SMAP1Q8IYB5 467 aaPredicted RBP17.27■□□□□ 0.36
CMTM3-212ENST00000566121 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 REXO1Q8N1G1 1221 aaKnown RBP17.27■□□□□ 0.36
CMTM3-212ENST00000566121 CRIPAKQ8N1N5 446 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 CCDC148Q8NFR7 591 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 PPM1EQ8WY54 764 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 C22orf23Q9BZE7 217 aa17.27■□□□□ 0.36
CMTM3-212ENST00000566121 TTC3P53804 2025 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 POTEB3A0JP26 581 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 C5orf67F2Z3F1 127 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 IPO5O00410 1097 aaKnown RBP17.26■□□□□ 0.35
CMTM3-212ENST00000566121 ENPP3O14638 875 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 CTSHP09668 335 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 ZNF76P36508 570 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 MRPS6P82932 125 aaKnown RBP17.26■□□□□ 0.35
CMTM3-212ENST00000566121 AKAP17AQ02040 695 aaKnown RBP17.26■□□□□ 0.35
CMTM3-212ENST00000566121 ZNF484Q5JVG2 852 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 FAM160B1Q5W0V3 765 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 POTEBQ6S5H4 581 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 TMCO2Q7Z6W1 182 aaPredicted RBP17.26■□□□□ 0.35
CMTM3-212ENST00000566121 PLA2G4DQ86XP0 818 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 ATP8B4Q8TF62 1192 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 OSBPL7Q9BZF2 842 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 CERS4Q9HA82 394 aa17.26■□□□□ 0.35
CMTM3-212ENST00000566121 RC3H2Q9HBD1 1191 aaKnown RBP17.26■□□□□ 0.35
CMTM3-212ENST00000566121 RWDD3Q9Y3V2 267 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms