RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 TNPO1Q92973 898 aaKnown RBP23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 GJA10Q969M2 543 aa23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 CTAGE1Q96RT6 745 aa23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 RNPEPQ9H4A4 650 aa23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 ZNF302Q9NR11 478 aa23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 MAFBQ9Y5Q3 323 aaPredicted RBP23.76■■□□□ 1.39
SHCBP1-205ENST00000566016 BACH1O14867 736 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 GNAT1P11488 350 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 RILPL1Q5EBL4 403 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 MTMR9Q96QG7 549 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 SAMM50Q9Y512 469 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 C17orf102A2RUQ5 167 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 TIMP1P01033 207 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 RAG1P15918 1043 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 SYT1P21579 422 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 MCM7P33993 719 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 BRAPQ7Z569 592 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 PPP1R13LQ8WUF5 828 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 NOC4LQ9BVI4 516 aaKnown RBP23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 NOD1Q9Y239 953 aa23.75■■□□□ 1.39
SHCBP1-205ENST00000566016 PITPNM1O00562 1244 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 CHMP2AO43633 222 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 MARCH6O60337 910 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 HSP90AA1P07900 732 aaKnown RBP23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 PDIA4P13667 645 aaKnown RBP23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 MARK3P27448 753 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 TOB1P50616 345 aaPredicted RBP23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 ADAM17P78536 824 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 RBL2Q08999 1139 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 SPIRE1Q08AE8 756 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 SWSAP1Q6NVH7 229 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 PDXDC2PQ6P474 469 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 HIPK3Q9H422 1215 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 TRIOBPQ9H2D6 2365 aa23.74■■□□□ 1.39
SHCBP1-205ENST00000566016 ATP2B1P20020 1258 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 PPFIA1Q13136 1202 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 PTK7Q13308 1070 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 PLCB4Q15147 1175 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 MIER3Q7Z3K6 550 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 SERINC5Q86VE9 423 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 CAGE1Q8TC20 777 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 ATP8B4Q8TF62 1192 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 LMBR1Q8WVP7 490 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 GDF15Q99988 308 aa23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 LBHD1Q9BQE6 289 aaPredicted RBP23.73■■□□□ 1.39
SHCBP1-205ENST00000566016 VPS37CA5D8V6 355 aaPredicted RBP23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 CYP2C9P11712 490 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 ITGB8P26012 769 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 MAGEA10P43363 369 aaPredicted RBP23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 HIC1Q14526 733 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 CCDC155Q8N6L0 562 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 ATP6V0A1Q93050 837 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 FAM167AQ96KS9 214 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 TMEM60Q9H2L4 133 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 FOXD4L1Q9NU39 408 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 GABBR1Q9UBS5 961 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 PCDHA12Q9UN75 941 aa23.72■■□□□ 1.39
SHCBP1-205ENST00000566016 MYH15Q9Y2K3 1946 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 POTEB3A0JP26 581 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 MBLAC1A4D2B0 266 aaPredicted RBP23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 RRN3P2A6NIE6 340 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 HBP1O60381 514 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 GRIK4Q16099 956 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 MFSD5Q6N075 450 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 POTEBQ6S5H4 581 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 TTC12Q9H892 705 aaPredicted RBP23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 SETD4Q9NVD3 440 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 TRPC6Q9Y210 931 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 COL1A2P08123 1366 aa23.71■■□□□ 1.39
SHCBP1-205ENST00000566016 LAD1O00515 517 aa23.7■■□□□ 1.38
SHCBP1-205ENST00000566016 OR52Z1P0C646 297 aa23.7■■□□□ 1.38
SHCBP1-205ENST00000566016 BFSP2Q13515 415 aa23.7■■□□□ 1.38
SHCBP1-205ENST00000566016 ZNF174Q15697 407 aa23.7■■□□□ 1.38
SHCBP1-205ENST00000566016 BBXQ8WY36 941 aaPredicted RBP23.7■■□□□ 1.38
SHCBP1-205ENST00000566016 PRO3102Q9H379 93 aa23.7■■□□□ 1.38
SHCBP1-205ENST00000566016 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.7■■□□□ 1.38
SHCBP1-205ENST00000566016 PCDHB6Q9Y5E3 794 aa23.7■■□□□ 1.38
SHCBP1-205ENST00000566016 EVPLQ92817 2033 aa23.7■■□□□ 1.38
SHCBP1-205ENST00000566016 EML1O00423 815 aa23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 STX6O43752 255 aa23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 INSRRP14616 1297 aa23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 ATP4AP20648 1035 aa23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 BMP8BP34820 402 aa23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 ZNF200P98182 395 aaPredicted RBP23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 DHX38Q92620 1227 aaKnown RBP23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 BADQ92934 168 aa23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 PPP1R12CQ9BZL4 782 aa23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 TUBE1Q9UJT0 475 aa23.69■■□□□ 1.38
SHCBP1-205ENST00000566016 TREHO43280 583 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 ZNF862O60290 1169 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 CAND2O75155 1236 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 NBR1Q14596 966 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 TAF2Q6P1X5 1199 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 C4orf32Q8N8J7 132 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 MTMR6Q9Y217 621 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 SCN5AQ14524 2016 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 LAMA3Q16787 3333 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 OATP04181 439 aa23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 RPLP2P05387 115 aaKnown RBP23.68■■□□□ 1.38
SHCBP1-205ENST00000566016 TXKP42681 527 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms