RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 PLEKHF1Q96S99 279 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 MAN1B1Q9UKM7 699 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 POLIQ9UNA4 740 aa14.68□□□□□ -0.06
CX3CL1-204ENST00000565912 SEC31AO94979 1220 aaKnown RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 DHX9Q08211 1270 aaKnown RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 BBS9Q3SYG4 887 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 PI4KBQ9UBF8 816 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 ERCC6L2Q5T890 1561 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 WDR91A4D1P6 747 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 hCG_1984214I3L0E3 225 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 IREB2P48200 963 aaKnown RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 EPHB4P54760 987 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 CTTNQ14247 550 aaKnown RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 CDC37Q16543 378 aaPredicted RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 TRIM67Q6ZTA4 783 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 ZNF713Q8N859 430 aaPredicted RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 NSUN7Q8NE18 718 aaKnown RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 EXT2Q93063 718 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 MSTO1Q9BUK6 570 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 AATKQ6ZMQ8 1374 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 ABCD1P33897 745 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 RWDD4Q6NW29 188 aaKnown RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 PDCD7Q8N8D1 485 aaKnown RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 RABGGTAQ92696 567 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 KIF1BO60333 1816 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 NCF2P19878 526 aaPredicted RBP14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 PI16Q6UXB8 463 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 ARHGEF25Q86VW2 580 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 ZWILCHQ9H900 591 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 POLR3EQ9NVU0 708 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 PYCARDQ9ULZ3 195 aa14.67□□□□□ -0.06
CX3CL1-204ENST00000565912 A0A087WWV3 80 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 CFLARO15519 480 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 TTI1O43156 1089 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 MMP1P03956 469 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 NFX1Q12986 1120 aaKnown RBP14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 PDCD2Q16342 344 aaPredicted RBP14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 ARL13BQ3SXY8 428 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 C10orf76Q5T2E6 689 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 TTC30BQ8N4P2 665 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 HSPH1Q92598 858 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 MTRQ99707 1265 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 SLC13A4Q9UKG4 626 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 ATF5Q9Y2D1 282 aaPredicted RBP14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 ATP7BP35670 1465 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 CYP2D7A0A087X1C5 515 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 EIF4A3P38919 411 aaKnown RBP14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 ACRBPQ8NEB7 543 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 OR6B3Q8NGW1 331 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 SPATA17Q96L03 361 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 MOSPD1Q9UJG1 213 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 TRPA1O75762 1119 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 MYL3P08590 195 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 SLFN14P0C7P3 912 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 YWHAHQ04917 246 aaPredicted RBP14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 TTC30AQ86WT1 665 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 SLC10A4Q96EP9 437 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 USP17L3A6NCW0 530 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 USP17L4A6NCW7 530 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 ZBED1O96006 694 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 NOP14P78316 857 aaKnown RBP14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 ZBTB41Q5SVQ8 909 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 USP17L1Q7RTZ2 530 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 UNC5CLQ8IV45 518 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 ZBED2Q9BTP6 218 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 EFHD1Q9BUP0 239 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 PRDM15P57071 1507 aaPredicted RBP14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 USP6P35125 1406 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 KIF23Q02241 960 aaPredicted RBP14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 ART3Q13508 389 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 ANGPTL8Q6UXH0 198 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 FBXL13Q8NEE6 735 aa14.66□□□□□ -0.06
CX3CL1-204ENST00000565912 SHROOM2Q13796 1616 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 FRMD3A2A2Y4 597 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 K7ERI5 159 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 PLCG1P19174 1290 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 C11orf57Q6ZUT1 292 aaPredicted RBP14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 CCDC124Q96CT7 223 aaKnown RBP14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 PUS7LQ9H0K6 701 aaKnown RBP14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 EXOC1LA0A1B0GW35 172 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 STK25O00506 426 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 SH3BGRP55822 239 aaPredicted RBP14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 SURF1Q15526 300 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 PPP4R4Q6NUP7 873 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 C1orf228Q6PIY5 440 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 FTOQ9C0B1 505 aaKnown RBP eCLIP14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 NHEJ1Q9H9Q4 299 aaPredicted RBP14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 SPTLC3Q9NUV7 552 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 LUC7L3O95232 432 aaKnown RBP14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 LCA5Q86VQ0 697 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 CCHCR1Q8TD31 782 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 TTC25Q96NG3 672 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 DNAJC8O75937 253 aaPredicted RBP14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 SETSIPP0DME0 302 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 HSP90AA5PQ58FG0 334 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 TCP11Q8WWU5 503 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 PBKQ96KB5 322 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 GINM1Q9NU53 330 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 RWDD2AQ9UIY3 292 aa14.65□□□□□ -0.06
CX3CL1-204ENST00000565912 CTNND1O60716 968 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms