RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 RDM1Q8NG50 284 aa17.14■□□□□ 0.33
KNOP1-203ENST00000565844 SYMPKQ92797 1274 aaKnown RBP17.14■□□□□ 0.33
KNOP1-203ENST00000565844 PCDHA10Q9Y5I2 948 aa17.14■□□□□ 0.33
KNOP1-203ENST00000565844 GSTTP1A0A1W2PQM5 241 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 MMP3P08254 477 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 C6orf222P0C671 652 aaPredicted RBP17.13■□□□□ 0.33
KNOP1-203ENST00000565844 SUPT20HL2P0C7V6 817 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 TCF7P36402 384 aaPredicted RBP17.13■□□□□ 0.33
KNOP1-203ENST00000565844 TXLNAP40222 546 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 UBA7P41226 1012 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 CPT1AP50416 773 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 EPHA7Q15375 998 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 KRT79Q5XKE5 535 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 HAUS3Q68CZ6 603 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 USP49Q70CQ1 688 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 SNX29Q8TEQ0 813 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 SEPT1Q8WYJ6 367 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 EPSTI1Q96J88 318 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 EIF2AK1Q9BQI3 630 aaKnown RBP17.13■□□□□ 0.33
KNOP1-203ENST00000565844 UPF3AQ9H1J1 476 aaKnown RBP17.13■□□□□ 0.33
KNOP1-203ENST00000565844 SPC25Q9HBM1 224 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 STK24Q9Y6E0 443 aa17.13■□□□□ 0.33
KNOP1-203ENST00000565844 A0A1W2PQ27 194 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 A0A1W2PQ64 194 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 A0A1W2PQD8 194 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 BACH1O14867 736 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 ATG7O95352 703 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 PGK1P00558 417 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 CCT6AP40227 531 aaKnown RBP17.12■□□□□ 0.33
KNOP1-203ENST00000565844 MAGEA10P43363 369 aaPredicted RBP17.12■□□□□ 0.33
KNOP1-203ENST00000565844 GJA9P57773 515 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 CYP4A11Q02928 519 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 ZRSR1Q15695 479 aaKnown RBP17.12■□□□□ 0.33
KNOP1-203ENST00000565844 FSCN1Q16658 493 aaKnown RBP17.12■□□□□ 0.33
KNOP1-203ENST00000565844 BRDTQ58F21 947 aaPredicted RBP17.12■□□□□ 0.33
KNOP1-203ENST00000565844 RESP18Q5W5W9 173 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 ABHD15Q6UXT9 468 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 CABP7Q86V35 215 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 BANK1Q8NDB2 785 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 FAM13BQ9NYF5 915 aa17.12■□□□□ 0.33
KNOP1-203ENST00000565844 LAMA3Q16787 3333 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 LTBP2Q14767 1821 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 A6NJR5 290 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 SOX1O00570 391 aaPredicted RBP17.11■□□□□ 0.33
KNOP1-203ENST00000565844 GADD45BO75293 160 aaPredicted RBP17.11■□□□□ 0.33
KNOP1-203ENST00000565844 CMA1P23946 247 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 IRX5P78411 483 aaPredicted RBP17.11■□□□□ 0.33
KNOP1-203ENST00000565844 MDM2Q00987 491 aaPredicted RBP17.11■□□□□ 0.33
KNOP1-203ENST00000565844 BEX3Q00994 111 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 DGKDQ16760 1214 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
KNOP1-203ENST00000565844 SWSAP1Q6NVH7 229 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 CCDC60Q8IWA6 550 aaPredicted RBP17.11■□□□□ 0.33
KNOP1-203ENST00000565844 FSIP1Q8NA03 581 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 NEK9Q8TD19 979 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 MRPS27Q92552 414 aaKnown RBP17.11■□□□□ 0.33
KNOP1-203ENST00000565844 LRCH3Q96II8 777 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 DYDC2Q96IM9 177 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
KNOP1-203ENST00000565844 AZI2Q9H6S1 392 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 RGL1Q9NZL6 768 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 GABBR1Q9UBS5 961 aa17.11■□□□□ 0.33
KNOP1-203ENST00000565844 LOXHD1Q8IVV2 1947 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 ARID2Q68CP9 1835 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 IGKV6D-21A0A0A0MT36 114 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 MYADML2A6NDP7 307 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 DNM1LO00429 736 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 CTAGE5O15320 804 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 PPFIA4O75335 1185 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 MED24O75448 989 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
KNOP1-203ENST00000565844 ZNF286BP0CG31 522 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 RPA1P27694 616 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 MCM4P33991 863 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 UBE2HP62256 183 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
KNOP1-203ENST00000565844 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
KNOP1-203ENST00000565844 UGCGQ16739 394 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 GNASQ5JWF2 1037 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 FAM160B1Q5W0V3 765 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 CATSPER3Q86XQ3 398 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 TPH2Q8IWU9 490 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 ATP6V0A1Q93050 837 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 CALML4Q96GE6 196 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 CDK5RAP3Q96JB5 506 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 GDF15Q99988 308 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 HSD17B14Q9BPX1 270 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 LXNQ9BS40 222 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 POLR3CQ9BUI4 534 aaPredicted RBP17.1■□□□□ 0.33
KNOP1-203ENST00000565844 CCSER1Q9C0I3 900 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 TUFT1Q9NNX1 390 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 ZNF302Q9NR11 478 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 EMSYQ7Z589 1322 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 IGSF9BQ9UPX0 1349 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 KDM3AQ9Y4C1 1321 aa17.1■□□□□ 0.33
KNOP1-203ENST00000565844 A0A1B0GVL5 298 aa17.09■□□□□ 0.33
KNOP1-203ENST00000565844 POTEB3A0JP26 581 aa17.09■□□□□ 0.33
KNOP1-203ENST00000565844 ADAMTS4O75173 837 aa17.09■□□□□ 0.33
KNOP1-203ENST00000565844 LGR5O75473 907 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms