RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 UPF3BQ9BZI7 483 aaKnown RBP19■□□□□ 0.63
USB1-211ENST00000565662 SLKQ9H2G2 1235 aaPredicted RBP19■□□□□ 0.63
USB1-211ENST00000565662 NKX2-4Q9H2Z4 354 aa19■□□□□ 0.63
USB1-211ENST00000565662 PCDHA4Q9UN74 947 aa19■□□□□ 0.63
USB1-211ENST00000565662 CEP131Q9UPN4 1083 aa19■□□□□ 0.63
USB1-211ENST00000565662 TRPC6Q9Y210 931 aa19■□□□□ 0.63
USB1-211ENST00000565662 TET1Q8NFU7 2136 aa19■□□□□ 0.63
USB1-211ENST00000565662 MICAL3Q7RTP6 2002 aa19■□□□□ 0.63
USB1-211ENST00000565662 COL4A6Q14031 1691 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 GRXCR1A8MXD5 290 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 PBX2P40425 430 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 GRIN2CQ14957 1233 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 ODR4Q5SWX8 454 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 IER5Q5VY09 327 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 TRAF7Q6Q0C0 670 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 MOXD1Q6UVY6 613 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 PPP1R13LQ8WUF5 828 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 FAM167AQ96KS9 214 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 RNF216Q9NWF9 866 aaPredicted RBP18.99■□□□□ 0.63
USB1-211ENST00000565662 PKD2L1Q9P0L9 805 aa18.99■□□□□ 0.63
USB1-211ENST00000565662 IGLV3-22A0A075B6J6 115 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 IGKV6D-21A0A0A0MT36 114 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 GTPBP6O43824 516 aaPredicted RBP18.98■□□□□ 0.63
USB1-211ENST00000565662 HBP1O60381 514 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 GJB5O95377 273 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 SFNP31947 248 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 ZNF200P98182 395 aaPredicted RBP18.98■□□□□ 0.63
USB1-211ENST00000565662 NME8Q8N427 588 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 RDM1Q8NG50 284 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 PGBD1Q96JS3 809 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 RAD9AQ99638 391 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 TSPYL2Q9H2G4 693 aaPredicted RBP18.98■□□□□ 0.63
USB1-211ENST00000565662 BCAS3Q9H6U6 928 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 NCOA5Q9HCD5 579 aaKnown RBP18.98■□□□□ 0.63
USB1-211ENST00000565662 TMEM260Q9NX78 707 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 VPS54Q9P1Q0 977 aa18.98■□□□□ 0.63
USB1-211ENST00000565662 POTEB3A0JP26 581 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 WDR64B1ANS9 1081 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 FAM86B1E9PN63 330 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 BACH1O14867 736 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 PSAPP07602 524 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 FAM86B2P0C5J1 330 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 ARP10275 920 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 ITGB3BPQ13352 177 aaPredicted RBP18.97■□□□□ 0.63
USB1-211ENST00000565662 POTEBQ6S5H4 581 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 KRT25Q7Z3Z0 450 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.97■□□□□ 0.63
USB1-211ENST00000565662 SAMD11Q96NU1 681 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 RIT2Q99578 217 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 IFIH1Q9BYX4 1025 aaKnown RBP18.97■□□□□ 0.63
USB1-211ENST00000565662 BRMS1Q9HCU9 246 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 ZNF302Q9NR11 478 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 YBX2Q9Y2T7 364 aaKnown RBP18.97■□□□□ 0.63
USB1-211ENST00000565662 INSL6Q9Y581 213 aa18.97■□□□□ 0.63
USB1-211ENST00000565662 MYH9P35579 1960 aaKnown RBP18.97■□□□□ 0.63
USB1-211ENST00000565662 PFKFB2O60825 505 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 CA3P07451 260 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 MARK3P27448 753 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 JAK3P52333 1124 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 ZNF484Q5JVG2 852 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 ABHD15Q6UXT9 468 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 BLIDQ8IZY5 108 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 CYP2W1Q8TAV3 490 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 ATP8B4Q8TF62 1192 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 FTHL17Q9BXU8 183 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 PCDHA10Q9Y5I2 948 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 COL6A3P12111 3177 aa18.96■□□□□ 0.63
USB1-211ENST00000565662 SMIM35A0A1B0GVV1 85 aa18.95■□□□□ 0.62
USB1-211ENST00000565662 INSRRP14616 1297 aa18.95■□□□□ 0.62
USB1-211ENST00000565662 GCFC2P16383 781 aaKnown RBP18.95■□□□□ 0.62
USB1-211ENST00000565662 HIC1Q14526 733 aa18.95■□□□□ 0.62
USB1-211ENST00000565662 GPNMBQ14956 572 aa18.95■□□□□ 0.62
USB1-211ENST00000565662 PRR16Q569H4 304 aa18.95■□□□□ 0.62
USB1-211ENST00000565662 PDXDC2PQ6P474 469 aa18.95■□□□□ 0.62
USB1-211ENST00000565662 DBF4BQ8NFT6 615 aa18.95■□□□□ 0.62
USB1-211ENST00000565662 BBXQ8WY36 941 aaPredicted RBP18.95■□□□□ 0.62
USB1-211ENST00000565662 WNT8BQ93098 351 aa18.95■□□□□ 0.62
USB1-211ENST00000565662 PCDHA2Q9Y5H9 948 aa18.95■□□□□ 0.62
USB1-211ENST00000565662 CTSHP09668 335 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 POU3F3P20264 500 aaPredicted RBP18.94■□□□□ 0.62
USB1-211ENST00000565662 RABGGTBP53611 331 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 MRPS6P82932 125 aaKnown RBP18.94■□□□□ 0.62
USB1-211ENST00000565662 MBTPS1Q14703 1052 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 PLCB4Q15147 1175 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 NONOQ15233 471 aaKnown RBP eCLIP18.94■□□□□ 0.62
USB1-211ENST00000565662 Q4G0T1 1027 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 TSHZ1Q6ZSZ6 1077 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 SYMPKQ92797 1274 aaKnown RBP18.94■□□□□ 0.62
USB1-211ENST00000565662 TEKT3Q9BXF9 490 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 PRDM12Q9H4Q4 367 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 LMCD1Q9NZU5 365 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 KDM3AQ9Y4C1 1321 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 PTPRSQ13332 1948 aa18.94■□□□□ 0.62
USB1-211ENST00000565662 CYP3A7-CYP3A51PA0A087WV96 503 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 CCDC194A0A1B0GVG4 234 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 GAS7O60861 476 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 CYP3A7P24462 503 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 SCRN1Q12765 414 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 STK3Q13188 491 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 TBCKQ8TEA7 893 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms