RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 POTEB3A0JP26 581 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 M0QZ92 97 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 IBSPP21815 317 aaPredicted RBP7.3□□□□□ -1.24
TCF4-228ENST00000565393 RPS6KB1P23443 525 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 KLRC1P26715 233 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 GNA11P29992 359 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 NLRP5P59047 1200 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 TMEM62Q0P6H9 643 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 AP3B2Q13367 1082 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 PLCB4Q15147 1175 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 FAM160B1Q5W0V3 765 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 MIS18BP1Q6P0N0 1132 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 PDXDC2PQ6P474 469 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 POTEBQ6S5H4 581 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 EP400NLQ6ZTU2 488 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 PLPPR4Q7Z2D5 763 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 TEX2Q8IWB9 1127 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 FIBCD1Q8N539 461 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 ADAMTS19Q8TE59 1207 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 GDPD5Q8WTR4 605 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 CCDC12Q8WUD4 166 aaPredicted RBP7.3□□□□□ -1.24
TCF4-228ENST00000565393 TRAPPC12Q8WVT3 735 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 KCNB2Q92953 911 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 PHKBQ93100 1093 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 UHRF1Q96T88 793 aaPredicted RBP7.3□□□□□ -1.24
TCF4-228ENST00000565393 PCYT2Q99447 389 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 LARP6Q9BRS8 491 aaKnown RBP7.3□□□□□ -1.24
TCF4-228ENST00000565393 C17orf80Q9BSJ5 609 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 ZNF577Q9BSK1 485 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 SLC26A6Q9BXS9 759 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 LMCD1Q9NZU5 365 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 TCEAL9Q9UHQ7 104 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 GINS2Q9Y248 185 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 CDY2AQ9Y6F7 541 aa7.3□□□□□ -1.24
TCF4-228ENST00000565393 MCM3APO60318 1980 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 NFASCO94856 1347 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 FAM86B1E9PN63 330 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 IPO5O00410 1097 aaKnown RBP7.29□□□□□ -1.24
TCF4-228ENST00000565393 LPXNO60711 386 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 ATG7O95352 703 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 FAM86B2P0C5J1 330 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 BMP1P13497 986 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 PDIA3P30101 505 aaKnown RBP7.29□□□□□ -1.24
TCF4-228ENST00000565393 CD52P31358 61 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 SREBF1P36956 1147 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 CLK2P49760 499 aaKnown RBP7.29□□□□□ -1.24
TCF4-228ENST00000565393 SLC26A2P50443 739 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 KCNQ1P51787 676 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 RCAN1P53805 252 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 MRPS6P82932 125 aaKnown RBP7.29□□□□□ -1.24
TCF4-228ENST00000565393 HTRA4P83105 476 aaPredicted RBP7.29□□□□□ -1.24
TCF4-228ENST00000565393 SSRP1Q08945 709 aaKnown RBP7.29□□□□□ -1.24
TCF4-228ENST00000565393 NFX1Q12986 1120 aaKnown RBP7.29□□□□□ -1.24
TCF4-228ENST00000565393 ITGB3BPQ13352 177 aaPredicted RBP7.29□□□□□ -1.24
TCF4-228ENST00000565393 GPM6BQ13491 265 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 LPIN1Q14693 890 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 PKN1Q16512 942 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 PTPROQ16827 1216 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 EPC2Q52LR7 807 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 PRR16Q569H4 304 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 MTHFD1LQ6UB35 978 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 ABHD15Q6UXT9 468 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 RUFY3Q7L099 469 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 NIPA1Q7RTP0 329 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 RPAINQ86UA6 219 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 TMEM192Q8IY95 271 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 NME8Q8N427 588 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 BICD2Q8TD16 824 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 SAMD11Q96NU1 681 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 CELF4Q9BZC1 486 aaKnown RBP7.29□□□□□ -1.24
TCF4-228ENST00000565393 ZMYND12Q9H0C1 365 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 ZNF302Q9NR11 478 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 TBC1D22BQ9NU19 505 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 SAMM50Q9Y512 469 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 PCDHA2Q9Y5H9 948 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 CYP46A1Q9Y6A2 500 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 LRRC37A2A6NM11 1700 aa7.29□□□□□ -1.24
TCF4-228ENST00000565393 SMIM35A0A1B0GVV1 85 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 MBLAC1A4D2B0 266 aaPredicted RBP7.28□□□□□ -1.24
TCF4-228ENST00000565393 CPLX1O14810 134 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 ADAMTS3O15072 1205 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 HBP1O60381 514 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 CCNE2O96020 404 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 RPLP2P05387 115 aaKnown RBP7.28□□□□□ -1.24
TCF4-228ENST00000565393 PSAPP07602 524 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 CYP3A4P08684 503 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 BMPR1AP36894 532 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 KRT76Q01546 638 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 MGAT3Q09327 533 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 STK3Q13188 491 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 BTG3Q14201 252 aaPredicted RBP7.28□□□□□ -1.24
TCF4-228ENST00000565393 ZNF484Q5JVG2 852 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 FBXO47Q5MNV8 452 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 CPLX2Q6PUV4 134 aaKnown RBP7.28□□□□□ -1.24
TCF4-228ENST00000565393 TSHZ1Q6ZSZ6 1077 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 TRIM22Q8IYM9 498 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 REXO1Q8N1G1 1221 aaKnown RBP7.28□□□□□ -1.24
TCF4-228ENST00000565393 METTL13Q8N6R0 699 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 RASGRP4Q8TDF6 673 aa7.28□□□□□ -1.24
TCF4-228ENST00000565393 NECAB3Q96P71 396 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms