RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 SLC5A5Q92911 643 aa29.27■■■□□ 2.28
NME3-208ENST00000565379 ZNF396Q96N95 335 aaPredicted RBP29.27■■■□□ 2.28
NME3-208ENST00000565379 MMP3P08254 477 aa29.26■■■□□ 2.27
NME3-208ENST00000565379 CHMP4BP1P59074 171 aa29.26■■■□□ 2.27
NME3-208ENST00000565379 PPIGQ13427 754 aaKnown RBP eCLIP29.26■■■□□ 2.271e-15■□□□□ 10.6
NME3-208ENST00000565379 FAM47CQ5HY64 1035 aa29.26■■■□□ 2.27
NME3-208ENST00000565379 JPH1Q9HDC5 661 aaPredicted RBP29.26■■■□□ 2.27
NME3-208ENST00000565379 PCDHB6Q9Y5E3 794 aa29.26■■■□□ 2.27
NME3-208ENST00000565379 ZNF365Q70YC5 407 aa29.25■■■□□ 2.27
NME3-208ENST00000565379 CYFIP1Q7L576 1253 aa29.25■■■□□ 2.27
NME3-208ENST00000565379 POTEDQ86YR6 584 aa29.25■■■□□ 2.27
NME3-208ENST00000565379 PPTC7Q8NI37 304 aa29.25■■■□□ 2.27
NME3-208ENST00000565379 VWCEQ96DN2 955 aa29.25■■■□□ 2.27
NME3-208ENST00000565379 TTYH1Q9H313 450 aaPredicted RBP29.25■■■□□ 2.27
NME3-208ENST00000565379 WNT7AO00755 349 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 GAS7O60861 476 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 KRT76Q01546 638 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 ITGB3BPQ13352 177 aaPredicted RBP29.24■■■□□ 2.27
NME3-208ENST00000565379 LRCH2Q5VUJ6 765 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 TMEM199Q8N511 208 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 SCLYQ96I15 445 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 SPATA33Q96N06 139 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 MTMR9Q96QG7 549 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 TEKT3Q9BXF9 490 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 SLC9A2Q9UBY0 812 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 ZDHHC9Q9Y397 364 aa29.24■■■□□ 2.27
NME3-208ENST00000565379 EYSQ5T1H1 3165 aa29.23■■■□□ 2.27
NME3-208ENST00000565379 TMEM265A0A087WTH1 108 aa29.23■■■□□ 2.27
NME3-208ENST00000565379 GRXCR1A8MXD5 290 aa29.23■■■□□ 2.27
NME3-208ENST00000565379 NOP56O00567 594 aaKnown RBP29.23■■■□□ 2.27
NME3-208ENST00000565379 DHX15O43143 795 aaKnown RBP29.23■■■□□ 2.27
NME3-208ENST00000565379 KPNA6O60684 536 aa29.23■■■□□ 2.27
NME3-208ENST00000565379 OR52Z1P0C646 297 aa29.23■■■□□ 2.27
NME3-208ENST00000565379 ZNF746Q6NUN9 644 aaPredicted RBP29.23■■■□□ 2.27
NME3-208ENST00000565379 KAT2BQ92831 832 aa29.23■■■□□ 2.27
NME3-208ENST00000565379 HAS1Q92839 578 aa29.23■■■□□ 2.27
NME3-208ENST00000565379 PKD2L1Q9P0L9 805 aa29.23■■■□□ 2.27
NME3-208ENST00000565379 PSMD10O75832 226 aa29.22■■■□□ 2.27
NME3-208ENST00000565379 FOXD4L5Q5VV16 416 aaPredicted RBP29.22■■■□□ 2.27
NME3-208ENST00000565379 FOXD4L4Q8WXT5 416 aaPredicted RBP29.22■■■□□ 2.27
NME3-208ENST00000565379 BCAS3Q9H6U6 928 aa29.22■■■□□ 2.27
NME3-208ENST00000565379 IL23AQ9NPF7 189 aa29.22■■■□□ 2.27
NME3-208ENST00000565379 CHMP5Q9NZZ3 219 aa29.22■■■□□ 2.27
NME3-208ENST00000565379 CXXC1Q9P0U4 656 aaPredicted RBP29.22■■■□□ 2.27
NME3-208ENST00000565379 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.21■■■□□ 2.27
NME3-208ENST00000565379 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.21■■■□□ 2.27
NME3-208ENST00000565379 PPFIA4O75335 1185 aa29.21■■■□□ 2.27
NME3-208ENST00000565379 PRPHP41219 470 aa29.21■■■□□ 2.27
NME3-208ENST00000565379 PTGDRQ13258 359 aa29.21■■■□□ 2.27
NME3-208ENST00000565379 NBR1Q14596 966 aa29.21■■■□□ 2.27
NME3-208ENST00000565379 SMAP1Q8IYB5 467 aaPredicted RBP29.21■■■□□ 2.27
NME3-208ENST00000565379 C4orf32Q8N8J7 132 aa29.21■■■□□ 2.27
NME3-208ENST00000565379 SEPT1Q8WYJ6 367 aa29.21■■■□□ 2.27
NME3-208ENST00000565379 CFAP45Q9UL16 551 aa29.21■■■□□ 2.27
NME3-208ENST00000565379 PCDHA12Q9UN75 941 aa29.21■■■□□ 2.27
NME3-208ENST00000565379 MORC2Q9Y6X9 1032 aaPredicted RBP29.21■■■□□ 2.27
NME3-208ENST00000565379 CHD9Q3L8U1 2897 aa29.21■■■□□ 2.27
NME3-208ENST00000565379 ATP2C1P98194 919 aaPredicted RBP29.2■■■□□ 2.26
NME3-208ENST00000565379 DGKDQ16760 1214 aa29.2■■■□□ 2.26
NME3-208ENST00000565379 RASIP1Q5U651 963 aa29.2■■■□□ 2.26
NME3-208ENST00000565379 ARL6IP4Q66PJ3 421 aaKnown RBP29.2■■■□□ 2.26
NME3-208ENST00000565379 RDM1Q8NG50 284 aa29.2■■■□□ 2.26
NME3-208ENST00000565379 MAFAQ8NHW3 353 aaPredicted RBP29.2■■■□□ 2.26
NME3-208ENST00000565379 COL25A1Q9BXS0 654 aaPredicted RBP29.2■■■□□ 2.26
NME3-208ENST00000565379 SEZ6LQ9BYH1 1024 aa29.2■■■□□ 2.26
NME3-208ENST00000565379 TMEM60Q9H2L4 133 aa29.2■■■□□ 2.26
NME3-208ENST00000565379 SCN5AQ14524 2016 aa29.2■■■□□ 2.26
NME3-208ENST00000565379 UNC80Q8N2C7 3258 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 ZNF286BP0CG31 522 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 HOXD8P13378 290 aaPredicted RBP29.19■■■□□ 2.26
NME3-208ENST00000565379 SFNP31947 248 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 PPP2R5CQ13362 524 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 SF3A1Q15459 793 aaKnown RBP29.19■■■□□ 2.26
NME3-208ENST00000565379 TMEM266Q2M3C6 531 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 HSDL1Q3SXM5 330 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 FAM173BQ6P4H8 233 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 MYLIPQ8WY64 445 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 CTAGE1Q96RT6 745 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 GPR20Q99678 358 aa29.19■■■□□ 2.26
NME3-208ENST00000565379 PBX2P40425 430 aa29.18■■■□□ 2.26
NME3-208ENST00000565379 JAK3P52333 1124 aa29.18■■■□□ 2.26
NME3-208ENST00000565379 NFRKBQ6P4R8 1299 aa29.18■■■□□ 2.26
NME3-208ENST00000565379 RAB34Q9BZG1 259 aa29.18■■■□□ 2.26
NME3-208ENST00000565379 TTC12Q9H892 705 aaPredicted RBP29.18■■■□□ 2.26
NME3-208ENST00000565379 WDR64B1ANS9 1081 aa29.17■■■□□ 2.26
NME3-208ENST00000565379 ATG7O95352 703 aa29.17■■■□□ 2.26
NME3-208ENST00000565379 TXKP42681 527 aa29.17■■■□□ 2.26
NME3-208ENST00000565379 NASPP49321 788 aaPredicted RBP29.17■■■□□ 2.26
NME3-208ENST00000565379 ACTR2P61160 394 aa29.17■■■□□ 2.26
NME3-208ENST00000565379 GDF6Q6KF10 455 aaPredicted RBP29.17■■■□□ 2.26
NME3-208ENST00000565379 PSRC1Q6PGN9 363 aaPredicted RBP29.17■■■□□ 2.26
NME3-208ENST00000565379 B3GNT9Q6UX72 402 aa29.17■■■□□ 2.26
NME3-208ENST00000565379 TELO2Q9Y4R8 837 aa29.17■■■□□ 2.26
NME3-208ENST00000565379 DDX39AO00148 427 aaKnown RBP29.16■■■□□ 2.26
NME3-208ENST00000565379 MIS18BP1Q6P0N0 1132 aa29.16■■■□□ 2.26
NME3-208ENST00000565379 DTHD1Q6ZMT9 781 aa29.16■■■□□ 2.26
NME3-208ENST00000565379 OTOP2Q7RTS6 562 aa29.16■■■□□ 2.26
NME3-208ENST00000565379 USP28Q96RU2 1077 aa29.16■■■□□ 2.26
NME3-208ENST00000565379 VAV3Q9UKW4 847 aa29.16■■■□□ 2.26
NME3-208ENST00000565379 PCDHA10Q9Y5I2 948 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms