RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 SMARCC2Q8TAQ2 1214 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 LRRC59Q96AG4 307 aaKnown RBP5.77□□□□□ -1.49
CAPN3-214ENST00000565274 E2F7Q96AV8 911 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 PLEKHG4BQ96PX9 1271 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 HAUS7Q99871 368 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 PPP1R12CQ9BZL4 782 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 TRIM7Q9C029 511 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 NUP62CLQ9H1M0 184 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 ZSCAN16Q9H4T2 348 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-214ENST00000565274 BICC1Q9H694 974 aaKnown RBP5.77□□□□□ -1.49
CAPN3-214ENST00000565274 C19orf44Q9H6X5 657 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 CAPN10Q9HC96 672 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 SH3GLB2Q9NR46 395 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 FBXO2Q9UK22 296 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-214ENST00000565274 CFAP45Q9UL16 551 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 SPG7Q9UQ90 795 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 ATP6V0A2Q9Y487 856 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 SQORQ9Y6N5 450 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 MORC2Q9Y6X9 1032 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-214ENST00000565274 CPDO75976 1380 aa5.77□□□□□ -1.49
CAPN3-214ENST00000565274 SH3TC1Q8TE82 1336 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 KDM6AO15550 1401 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 A6NCN8 305 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 STXBP3O00186 592 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 TSPAN6O43657 245 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 LARGE1O95461 756 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 KRT18P05783 430 aaKnown RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 PTGS1P23219 599 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 CCNCP24863 283 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 ADD2P35612 726 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 UBA7P41226 1012 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 GJA8P48165 433 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 TNNI2P48788 182 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 CTAG1AP78358 180 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 TOB2Q14106 344 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 NFE2Q16621 373 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 SHROOM1Q2M3G4 852 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 KIF4BQ2VIQ3 1234 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 ALFQ53S48 1182 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 TNNI3KQ59H18 835 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 SPDYCQ5MJ68 293 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 SFMBT2Q5VUG0 894 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 NAA16Q6N069 864 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 KRT28Q7Z3Y7 464 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 CCDC91Q7Z6B0 441 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 RASSF3Q86WH2 238 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 PLA2G4DQ86XP0 818 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 CCDC83Q8IWF9 413 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 IFNL2Q8IZJ0 200 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 TEX9Q8N6V9 391 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 PLBD2Q8NHP8 589 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 GSDMBQ8TAX9 411 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 BICD1Q96G01 975 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 C1orf74Q96LT6 269 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 MAK16Q9BXY0 300 aaKnown RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 NGRNQ9NPE2 291 aaKnown RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 HELLSQ9NRZ9 838 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 DDX19AQ9NUU7 478 aaKnown RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 SPATA7Q9P0W8 599 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 LUZP4Q9P127 313 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 TAGLN3Q9UI15 199 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 CTNNA3Q9UI47 895 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 LRFN2Q9ULH4 789 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 TRIM33Q9UPN9 1127 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 PA2G4Q9UQ80 394 aaKnown RBP5.76□□□□□ -1.49
CAPN3-214ENST00000565274 ATP8A1Q9Y2Q0 1164 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 FPGT-TNNI3KV9GXZ4 949 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 PALLDQ8WX93 1383 aa5.76□□□□□ -1.49
CAPN3-214ENST00000565274 A0A0D9SFI3 127 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 LINC00854A0A1B0GVQ3 168 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 FAM177BA6PVY3 158 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 FOXN3O00409 490 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-214ENST00000565274 PAX4O43316 350 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 NEMFO60524 1076 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 PFKFB2O60825 505 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 CIAO1O76071 339 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 ANXA1P04083 346 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 MYL1P05976 194 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 RAC2P15153 192 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 WEE1P30291 646 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 IRAK1P51617 712 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 ZNF75DP51815 510 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 HSD17B7P56937 341 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 EXOSC10Q01780 885 aaKnown RBP5.75□□□□□ -1.49
CAPN3-214ENST00000565274 DNM1Q05193 864 aaKnown RBP5.75□□□□□ -1.49
CAPN3-214ENST00000565274 RESTQ13127 1097 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 PAK2Q13177 524 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 LRRC41Q15345 812 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 PDCD2Q16342 344 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-214ENST00000565274 PKN2Q16513 984 aaKnown RBP5.75□□□□□ -1.49
CAPN3-214ENST00000565274 CWF19L2Q2TBE0 894 aaKnown RBP5.75□□□□□ -1.49
CAPN3-214ENST00000565274 MCMDC2Q4G0Z9 681 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 PLEKHG4Q58EX7 1191 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 PPP4R4Q6NUP7 873 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 CFAP161Q6P656 301 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 RTL10Q7L3V2 364 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 TTC6Q86TZ1 520 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 LRRC49Q8IUZ0 686 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 EFCAB13Q8IY85 973 aa5.75□□□□□ -1.49
CAPN3-214ENST00000565274 STK11IPQ8N1F8 1099 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms