RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-205ENST00000564899 SEMA6BQ9H3T3 888 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 UNC45AQ9H3U1 944 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 CLSTN2Q9H4D0 955 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 DISC1Q9NRI5 854 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 STK24Q9Y6E0 443 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 SYNGAP1Q96PV0 1343 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 KDM3AQ9Y4C1 1321 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 EML1O00423 815 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 DHX15O43143 795 aaKnown RBP12.43□□□□□ -0.42
SF3B3-205ENST00000564899 SLC26A4O43511 780 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 KCNA2P16389 499 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 CYP2C19P33261 490 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 CCT6AP40227 531 aaKnown RBP12.43□□□□□ -0.42
SF3B3-205ENST00000564899 STAT6P42226 847 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 RTP1P59025 263 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 RRAGBQ5VZM2 374 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 B3GNT9Q6UX72 402 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 MAMDC4Q6UXC1 1216 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 SH3RF1Q7Z6J0 888 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 MSL3Q8N5Y2 521 aaKnown RBP12.43□□□□□ -0.42
SF3B3-205ENST00000564899 IQUBQ8NA54 791 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 CNNM3Q8NE01 707 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 TIGD1Q96MW7 591 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 TINF2Q9BSI4 451 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 TNMDQ9H2S6 317 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 VTA1Q9NP79 307 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-205ENST00000564899 USP25Q9UHP3 1055 aa12.43□□□□□ -0.42
SF3B3-205ENST00000564899 LRRC37A2A6NM11 1700 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 BDP1A6H8Y1 2624 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 NFASCO94856 1347 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
SF3B3-205ENST00000564899 PLCG1P19174 1290 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 UBA1P22314 1058 aaKnown RBP12.42□□□□□ -0.42
SF3B3-205ENST00000564899 ITGB8P26012 769 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 KRT76Q01546 638 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 E2F4Q16254 413 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 CAMK4Q16566 473 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 LONRF3Q496Y0 759 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 TMEM119Q4V9L6 283 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 GJC2Q5T442 439 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-205ENST00000564899 MIER3Q7Z3K6 550 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 CEP57L1Q8IYX8 460 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 CCDC34Q96HJ3 373 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 PNMA5Q96PV4 448 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 PLIN2Q99541 437 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 SENP7Q9BQF6 1050 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 ANP32EQ9BTT0 268 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 JPH1Q9HDC5 661 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-205ENST00000564899 SERTAD1Q9UHV2 236 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 ATP11BQ9Y2G3 1177 aa12.42□□□□□ -0.42
SF3B3-205ENST00000564899 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 TRIM43BA6NCK2 446 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 WDR64B1ANS9 1081 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 CTAGE5O15320 804 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 SORBS3O60504 671 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 MED24O75448 989 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 ARIH2O95376 493 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 SNAI1O95863 264 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-205ENST00000564899 IGHA2P01877 340 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 SLFN14P0C7P3 912 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 TGFB3P10600 412 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 SFNP31947 248 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 JAK3P52333 1124 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 EPHB4P54760 987 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 SP2Q02086 613 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 GRB10Q13322 594 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 NEDD9Q14511 834 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 TTLL4Q14679 1199 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 EPHA7Q15375 998 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 ZSCAN23Q3MJ62 389 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 HYIQ5T013 277 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 OLFML2BQ68BL8 750 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-205ENST00000564899 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 GIMAP8Q8ND71 665 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-205ENST00000564899 NEK9Q8TD19 979 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 SCFD2Q8WU76 684 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 BADQ92934 168 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 TRIM43Q96BQ3 446 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-205ENST00000564899 LBHD1Q9BQE6 289 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-205ENST00000564899 EIF2AK1Q9BQI3 630 aaKnown RBP12.41□□□□□ -0.42
SF3B3-205ENST00000564899 NT5C3AQ9H0P0 336 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 SLC9A2Q9UBY0 812 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 DDX20Q9UHI6 824 aaKnown RBP12.41□□□□□ -0.42
SF3B3-205ENST00000564899 ZHX1Q9UKY1 873 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-205ENST00000564899 SAMM50Q9Y512 469 aa12.41□□□□□ -0.42
SF3B3-205ENST00000564899 LETM1O95202 739 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-205ENST00000564899 GGPS1O95749 300 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 CCNE2O96020 404 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 TXNP10599 105 aaKnown RBP12.4□□□□□ -0.42
SF3B3-205ENST00000564899 RPA1P27694 616 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 SP4Q02446 784 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 CYP4A11Q02928 519 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 LY6KQ17RY6 165 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 TRIM60Q495X7 471 aa12.4□□□□□ -0.42
SF3B3-205ENST00000564899 NAALADL2Q58DX5 795 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms