RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CSGALNACT2Q8N6G5 542 aa21.73■■□□□ 1.07
CLN6-205ENST00000564846 BANK1Q8NDB2 785 aa21.73■■□□□ 1.07
CLN6-205ENST00000564846 MS4A4AQ96JQ5 239 aa21.73■■□□□ 1.07
CLN6-205ENST00000564846 MROH8Q9H579 483 aa21.73■■□□□ 1.07
CLN6-205ENST00000564846 WRAP73Q9P2S5 460 aaPredicted RBP21.73■■□□□ 1.07
CLN6-205ENST00000564846 NFASCO94856 1347 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 B4DLN1 442 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 SPATA31C2B4DYI2 1134 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 KCNJ18B7U540 433 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 KCNA2P16389 499 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 EEF1GP26641 437 aaKnown RBP21.72■■□□□ 1.07
CLN6-205ENST00000564846 CACNB1Q02641 598 aaPredicted RBP21.72■■□□□ 1.07
CLN6-205ENST00000564846 RAD51AP2Q09MP3 1159 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 KCNJ12Q14500 433 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 FAM133AQ8N9E0 248 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 DUSP9Q99956 384 aaKnown RBP21.72■■□□□ 1.07
CLN6-205ENST00000564846 RUSC1Q9BVN2 902 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 KCNF1Q9H3M0 494 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 SEMA6BQ9H3T3 888 aa21.72■■□□□ 1.07
CLN6-205ENST00000564846 DCAF8L1A6NGE4 600 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 TBCAO75347 108 aaKnown RBP21.71■■□□□ 1.07
CLN6-205ENST00000564846 ZBTB48P10074 688 aaPredicted RBP21.71■■□□□ 1.07
CLN6-205ENST00000564846 ICAM3P32942 547 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 LRRC63Q05C16 580 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 Q3C1V9 767 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 C1orf186Q6ZWK4 172 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 SRRTQ9BXP5 876 aaKnown RBP21.71■■□□□ 1.07
CLN6-205ENST00000564846 ZHX3Q9H4I2 956 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 NMRK2Q9NPI5 230 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 COL4A3BPQ9Y5P4 624 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 ASTN1O14525 1302 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 CCL15-CCL14A0A0B4J2E2 113 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 CCNE2O96020 404 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 EDNRBP24530 442 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 ERVK-9P63128 1117 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 ERVK-24P63145 666 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 KRT31Q15323 416 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 CCL15Q16663 113 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 ANKRD23Q86SG2 305 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 IRF2BP1Q8IU81 584 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 FAM114A1Q8IWE2 563 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 LRRC8AQ8IWT6 810 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 SMAP1Q8IYB5 467 aaPredicted RBP21.71■■□□□ 1.07
CLN6-205ENST00000564846 SHCBP1Q8NEM2 672 aa21.71■■□□□ 1.07
CLN6-205ENST00000564846 MPHOSPH6Q99547 160 aaKnown RBP21.71■■□□□ 1.07
CLN6-205ENST00000564846 RRAGDQ9NQL2 400 aaPredicted RBP21.71■■□□□ 1.07
CLN6-205ENST00000564846 MAGEC2Q9UBF1 373 aaPredicted RBP21.71■■□□□ 1.07
CLN6-205ENST00000564846 DBR1Q9UK59 544 aaKnown RBP21.71■■□□□ 1.07
CLN6-205ENST00000564846 SOWAHBA6NEL2 793 aa21.7■■□□□ 1.06
CLN6-205ENST00000564846 PDHXO00330 501 aa21.7■■□□□ 1.06
CLN6-205ENST00000564846 GAP43P17677 238 aa21.7■■□□□ 1.06
CLN6-205ENST00000564846 KCTD2Q14681 263 aa21.7■■□□□ 1.06
CLN6-205ENST00000564846 SPRYD7Q5W111 196 aa21.7■■□□□ 1.06
CLN6-205ENST00000564846 CCDC150Q8NCX0 1101 aa21.7■■□□□ 1.06
CLN6-205ENST00000564846 SMCR8Q8TEV9 937 aaPredicted RBP21.7■■□□□ 1.06
CLN6-205ENST00000564846 CACTINQ8WUQ7 758 aaKnown RBP21.7■■□□□ 1.06
CLN6-205ENST00000564846 TSG101Q99816 390 aa21.7■■□□□ 1.06
CLN6-205ENST00000564846 RTN4Q9NQC3 1192 aaKnown RBP21.7■■□□□ 1.06
CLN6-205ENST00000564846 LCTP09848 1927 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 ARHGEF35A5YM69 484 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 ZBTB39O15060 712 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 FGFR1OPO95684 399 aaKnown RBP21.69■■□□□ 1.06
CLN6-205ENST00000564846 CYP2C8P10632 490 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 PSMC5P62195 406 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 LRRC41Q15345 812 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 C4orf19Q8IY42 314 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 GLIS3Q8NEA6 775 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 JPH1Q9HDC5 661 aaPredicted RBP21.69■■□□□ 1.06
CLN6-205ENST00000564846 TBC1D7Q9P0N9 293 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 ODF2LQ9ULJ1 636 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 PCDHA10Q9Y5I2 948 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 BTBD19C9JJ37 291 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 ZNF500O60304 480 aaPredicted RBP21.69■■□□□ 1.06
CLN6-205ENST00000564846 GUCY2CP25092 1073 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 COPB1P53618 953 aaKnown RBP21.69■■□□□ 1.06
CLN6-205ENST00000564846 SPECC1LQ69YQ0 1117 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 BRI3BPQ8WY22 251 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 MMP19Q99542 508 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 OLFML3Q9NRN5 406 aa21.69■■□□□ 1.06
CLN6-205ENST00000564846 CHADLQ6NUI6 762 aa21.68■■□□□ 1.06
CLN6-205ENST00000564846 SFR1Q86XK3 245 aa21.68■■□□□ 1.06
CLN6-205ENST00000564846 GPRC5AQ8NFJ5 357 aa21.68■■□□□ 1.06
CLN6-205ENST00000564846 SLC9A2Q9UBY0 812 aa21.68■■□□□ 1.06
CLN6-205ENST00000564846 N4BP3O15049 544 aa21.67■■□□□ 1.06
CLN6-205ENST00000564846 DKC1O60832 514 aaKnown RBP eCLIP21.67■■□□□ 1.06
CLN6-205ENST00000564846 FAM13AO94988 1023 aa21.67■■□□□ 1.06
CLN6-205ENST00000564846 ITGBL1O95965 494 aaPredicted RBP21.67■■□□□ 1.06
CLN6-205ENST00000564846 CCNA1P78396 465 aa21.67■■□□□ 1.06
CLN6-205ENST00000564846 CST9Q5W186 159 aa21.67■■□□□ 1.06
CLN6-205ENST00000564846 SCFD1Q8WVM8 642 aa21.67■■□□□ 1.06
CLN6-205ENST00000564846 SEL1LQ9UBV2 794 aa21.67■■□□□ 1.06
CLN6-205ENST00000564846 LOXHD1Q8IVV2 1947 aa21.67■■□□□ 1.06
CLN6-205ENST00000564846 DNAJC25-GNG10A0A024R161 153 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 RSPH10B2B2RC85 870 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 RSPH10BP0C881 870 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 SFPQP23246 707 aaKnown RBP eCLIP21.66■■□□□ 1.06
CLN6-205ENST00000564846 YWHABP31946 246 aaKnown RBP21.66■■□□□ 1.06
CLN6-205ENST00000564846 GCLCP48506 637 aaPredicted RBP21.66■■□□□ 1.06
CLN6-205ENST00000564846 LRMPQ12912 555 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 MKRN3Q13064 507 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms