RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 PCDHA6Q9UN73 950 aa16.28■□□□□ 0.2
COMMD4-211ENST00000564815 PCDHA8Q9Y5H6 950 aa16.28■□□□□ 0.2
COMMD4-211ENST00000564815 UBIAD1Q9Y5Z9 338 aa16.28■□□□□ 0.2
COMMD4-211ENST00000564815 TAF6LQ9Y6J9 622 aa16.28■□□□□ 0.2
COMMD4-211ENST00000564815 XIRP2A4UGR9 3374 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 MBLAC1A4D2B0 266 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-211ENST00000564815 FAM86C2PA6NEL3 165 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 SH2B2O14492 632 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-211ENST00000564815 PLEKHA8P1O95397 391 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 IGBP1P78318 339 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 MRPS6P82932 125 aaKnown RBP16.27■□□□□ 0.2
COMMD4-211ENST00000564815 NAALADL2Q58DX5 795 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 FBXO47Q5MNV8 452 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 RUFY4Q6ZNE9 571 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 NME8Q8N427 588 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 FANCBQ8NB91 859 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 KHSRPQ92945 711 aaKnown RBP eCLIP16.27■□□□□ 0.2
COMMD4-211ENST00000564815 UIMC1Q96RL1 719 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 POP1Q99575 1024 aaKnown RBP16.27■□□□□ 0.2
COMMD4-211ENST00000564815 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-211ENST00000564815 SUPT16HQ9Y5B9 1047 aaKnown RBP16.27■□□□□ 0.2
COMMD4-211ENST00000564815 CDY2AQ9Y6F7 541 aa16.27■□□□□ 0.2
COMMD4-211ENST00000564815 COL4A4P53420 1690 aaPredicted RBP16.27■□□□□ 0.19
COMMD4-211ENST00000564815 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 DCXO43602 365 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 FOSP01100 380 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-211ENST00000564815 INSRRP14616 1297 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 MGAT3Q09327 533 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 CCDC82Q8N4S0 544 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 CLP1Q92989 425 aaKnown RBP16.26■□□□□ 0.19
COMMD4-211ENST00000564815 GLT8D2Q9H1C3 349 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 PKD2L1Q9P0L9 805 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 SLC9A2Q9UBY0 812 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 TRPC6Q9Y210 931 aa16.26■□□□□ 0.19
COMMD4-211ENST00000564815 DGKIO75912 1065 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-211ENST00000564815 STAT5BP51692 787 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 COL19A1Q14993 1142 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 ODR4Q5SWX8 454 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 RNF20Q5VTR2 975 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 ADHFE1Q8IWW8 467 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 CMTR1Q8N1G2 835 aaKnown RBP16.25■□□□□ 0.19
COMMD4-211ENST00000564815 MXRA8Q9BRK3 442 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 FAM49AQ9H0Q0 323 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-211ENST00000564815 C11orf16Q9NQ32 467 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 LRFN2Q9ULH4 789 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 TELO2Q9Y4R8 837 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 PCDHA2Q9Y5H9 948 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 TRPV2Q9Y5S1 764 aa16.25■□□□□ 0.19
COMMD4-211ENST00000564815 GRM6O15303 877 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 RXRAP19793 462 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 ZNF76P36508 570 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 SLC26A2P50443 739 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 UBE2SQ16763 222 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 MARCH8Q5T0T0 291 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 NPAS4Q8IUM7 802 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 CMTR2Q8IYT2 770 aaKnown RBP16.24■□□□□ 0.19
COMMD4-211ENST00000564815 P2RX5Q93086 422 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 ZNF689Q96CS4 500 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-211ENST00000564815 IGFLR1Q9H665 355 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 KCNH7Q9NS40 1196 aa16.24■□□□□ 0.19
COMMD4-211ENST00000564815 RBM28Q9NW13 759 aaKnown RBP16.24■□□□□ 0.19
COMMD4-211ENST00000564815 NFASCO94856 1347 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 SLC27A2O14975 620 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 CD52P31358 61 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 ZP2Q05996 745 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 PAK2Q13177 524 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 CTC1Q2NKJ3 1217 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 CREB3L3Q68CJ9 461 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 TMTC3Q6ZXV5 915 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 CELF4Q9BZC1 486 aaKnown RBP16.23■□□□□ 0.19
COMMD4-211ENST00000564815 PLAGL2Q9UPG8 496 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 COL4A6Q14031 1691 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 MYO7AQ13402 2215 aa16.23■□□□□ 0.19
COMMD4-211ENST00000564815 hCG_1642624A0A1W2PR95 340 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 MMP1P03956 469 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 NAPAP54920 295 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 ACTR2P61160 394 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 KRT76Q01546 638 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 CEP55Q53EZ4 464 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 FAM160B1Q5W0V3 765 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 POTEBQ6S5H4 581 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 LSG1Q9H089 658 aaKnown RBP16.22■□□□□ 0.19
COMMD4-211ENST00000564815 KCNH6Q9H252 994 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 AGO3Q9H9G7 860 aaKnown RBP16.22■□□□□ 0.19
COMMD4-211ENST00000564815 ALG13Q9NP73 1137 aaKnown RBP16.22■□□□□ 0.19
COMMD4-211ENST00000564815 RIC8AQ9NPQ8 531 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 AAASQ9NRG9 546 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 CD207Q9UJ71 328 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 PADI3Q9ULW8 664 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 PCDHB7Q9Y5E2 793 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 TTC3P53804 2025 aa16.22■□□□□ 0.19
COMMD4-211ENST00000564815 DOCK5Q9H7D0 1870 aa16.21■□□□□ 0.19
COMMD4-211ENST00000564815 SMIM35A0A1B0GVV1 85 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms